RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 HTN1P15515 57 aa0.99□□□□□ -2.25
NEDD4-205ENST00000506154 LCE1EQ5T753 118 aa0.99□□□□□ -2.25
NEDD4-205ENST00000506154 SYNE1Q8NF91 8797 aaKnown RBP0.98□□□□□ -2.25
NEDD4-205ENST00000506154 KRTAP5-4Q6L8H1 288 aa0.98□□□□□ -2.25
NEDD4-205ENST00000506154 MUC12Q9UKN1 5478 aa0.98□□□□□ -2.25
NEDD4-205ENST00000506154 Q5VSD8 79 aa0.97□□□□□ -2.25
NEDD4-205ENST00000506154 KRTAP19-8Q3LI54 63 aa0.97□□□□□ -2.25
NEDD4-205ENST00000506154 KRTAP10-10P60014 251 aa0.97□□□□□ -2.25
NEDD4-205ENST00000506154 MT1HP80294 61 aa0.96□□□□□ -2.26
NEDD4-205ENST00000506154 SPRR2GQ9BYE4 73 aa0.94□□□□□ -2.26
NEDD4-205ENST00000506154 UBE2DNLQ8IWF7 75 aa0.94□□□□□ -2.26
NEDD4-205ENST00000506154 M0QZ58 72 aa0.93□□□□□ -2.26
NEDD4-205ENST00000506154 MT1BP07438 61 aa0.93□□□□□ -2.26
NEDD4-205ENST00000506154 KRTAP10-5P60370 271 aa0.93□□□□□ -2.26
NEDD4-205ENST00000506154 KRTAP2-3P0C7H8 128 aa0.92□□□□□ -2.26
NEDD4-205ENST00000506154 KRTAP2-4Q9BYR9 128 aa0.92□□□□□ -2.26
NEDD4-205ENST00000506154 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
NEDD4-205ENST00000506154 SPINK1P00995 79 aa0.91□□□□□ -2.26
NEDD4-205ENST00000506154 MT2AP02795 61 aa0.91□□□□□ -2.26
NEDD4-205ENST00000506154 DMBT1Q9UGM3 2413 aaPredicted RBP0.91□□□□□ -2.26
NEDD4-205ENST00000506154 MT1FP04733 61 aa0.91□□□□□ -2.26
NEDD4-205ENST00000506154 KRTAP19-6Q3LI70 58 aa0.91□□□□□ -2.26
NEDD4-205ENST00000506154 KRTAP6-3Q3LI67 103 aa0.9□□□□□ -2.26
NEDD4-205ENST00000506154 MDN1Q9NU22 5596 aa0.89□□□□□ -2.27
NEDD4-205ENST00000506154 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
NEDD4-205ENST00000506154 NEBP20929 6669 aa0.88□□□□□ -2.27
NEDD4-205ENST00000506154 KRTAP10-7P60409 375 aaPredicted RBP0.88□□□□□ -2.27
NEDD4-205ENST00000506154 MT1XP80297 61 aa0.87□□□□□ -2.27
NEDD4-205ENST00000506154 KRTAP5-5Q701N2 237 aaPredicted RBP0.85□□□□□ -2.27
NEDD4-205ENST00000506154 HTN3P15516 51 aa0.85□□□□□ -2.27
NEDD4-205ENST00000506154 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
NEDD4-205ENST00000506154 CRCT1Q9UGL9 99 aa0.85□□□□□ -2.27
NEDD4-205ENST00000506154 MACF1Q9UPN3 7388 aaKnown RBP0.84□□□□□ -2.27
NEDD4-205ENST00000506154 A0A0D9SG42 100 aa0.84□□□□□ -2.27
NEDD4-205ENST00000506154 KRTAP19-7Q3SYF9 63 aa0.83□□□□□ -2.28
NEDD4-205ENST00000506154 KRTAP9-6A8MVA2 160 aa0.81□□□□□ -2.28
NEDD4-205ENST00000506154 KRTAP5-8O75690 187 aa0.81□□□□□ -2.28
NEDD4-205ENST00000506154 SMR3BP02814 79 aaPredicted RBP0.81□□□□□ -2.28
NEDD4-205ENST00000506154 KRTAP19-5Q3LI72 72 aa0.81□□□□□ -2.28
NEDD4-205ENST00000506154 LCE3AQ5TA76 89 aa0.8□□□□□ -2.28
NEDD4-205ENST00000506154 C9orf92A6NGG3 77 aa0.79□□□□□ -2.28
NEDD4-205ENST00000506154 KRTAP5-11Q6L8G4 156 aa0.78□□□□□ -2.28
NEDD4-205ENST00000506154 KRTAP4-4Q9BYR3 166 aa0.78□□□□□ -2.28
NEDD4-205ENST00000506154 KRTAP12-4P60329 112 aa0.78□□□□□ -2.28
NEDD4-205ENST00000506154 SYNE2Q8WXH0 6885 aaKnown RBP0.78□□□□□ -2.29
NEDD4-205ENST00000506154 TNP1P09430 55 aa0.76□□□□□ -2.29
NEDD4-205ENST00000506154 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
NEDD4-205ENST00000506154 MT1EP04732 61 aa0.75□□□□□ -2.29
NEDD4-205ENST00000506154 FSIP2Q5CZC0 6907 aa0.72□□□□□ -2.29
NEDD4-205ENST00000506154 MT1LQ93083 61 aa0.72□□□□□ -2.29
NEDD4-205ENST00000506154 KRTAP5-7Q6L8G8 165 aa0.71□□□□□ -2.3
NEDD4-205ENST00000506154 KRTAP5-1Q6L8H4 278 aa0.69□□□□□ -2.3
NEDD4-205ENST00000506154 MT1AP04731 61 aa0.69□□□□□ -2.3
NEDD4-205ENST00000506154 MT1MQ8N339 61 aa0.67□□□□□ -2.3
NEDD4-205ENST00000506154 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
NEDD4-205ENST00000506154 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
NEDD4-205ENST00000506154 MT1GP13640 62 aa0.64□□□□□ -2.31
NEDD4-205ENST00000506154 LCE1CQ5T751 118 aa0.63□□□□□ -2.31
NEDD4-205ENST00000506154 LCE1BQ5T7P3 118 aa0.63□□□□□ -2.31
NEDD4-205ENST00000506154 PRM1P04553 51 aa0.61□□□□□ -2.31
NEDD4-205ENST00000506154 KRTAP20-1Q3LI63 56 aa0.6□□□□□ -2.31
NEDD4-205ENST00000506154 M0R2T5 61 aa0.59□□□□□ -2.31
NEDD4-205ENST00000506154 KRTAP4-3Q9BYR4 195 aa0.59□□□□□ -2.32
NEDD4-205ENST00000506154 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.32
NEDD4-205ENST00000506154 DSTQ03001 7570 aaKnown RBP0.58□□□□□ -2.32
NEDD4-205ENST00000506154 KRTAP6-1Q3LI64 71 aa0.58□□□□□ -2.32
NEDD4-205ENST00000506154 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
NEDD4-205ENST00000506154 SPRR2FQ96RM1 72 aa0.57□□□□□ -2.32
NEDD4-205ENST00000506154 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
NEDD4-205ENST00000506154 SPRR2AP35326 72 aa0.54□□□□□ -2.32
NEDD4-205ENST00000506154 SPRR2BP35325 72 aa0.54□□□□□ -2.32
NEDD4-205ENST00000506154 SPRR2EP22531 72 aa0.52□□□□□ -2.33
NEDD4-205ENST00000506154 SPRR2DP22532 72 aa0.52□□□□□ -2.33
NEDD4-205ENST00000506154 KRTAP21-2Q3LI59 83 aa0.49□□□□□ -2.33
NEDD4-205ENST00000506154 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
NEDD4-205ENST00000506154 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
NEDD4-205ENST00000506154 MT4P47944 62 aa0.33□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms