RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 KRTAP9-3Q9BYQ3 159 aa3.01□□□□□ -1.93
PPARGC1A-204ENST00000506055 KRTAP10-12P60413 245 aa3□□□□□ -1.93
PPARGC1A-204ENST00000506055 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
PPARGC1A-204ENST00000506055 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
PPARGC1A-204ENST00000506055 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
PPARGC1A-204ENST00000506055 PRO2289Q9P1D8 64 aa2.94□□□□□ -1.94
PPARGC1A-204ENST00000506055 USH2AO75445 5202 aa2.92□□□□□ -1.94
PPARGC1A-204ENST00000506055 KMT2DO14686 5537 aa2.87□□□□□ -1.95
PPARGC1A-204ENST00000506055 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
PPARGC1A-204ENST00000506055 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
PPARGC1A-204ENST00000506055 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
PPARGC1A-204ENST00000506055 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
PPARGC1A-204ENST00000506055 INE1O15225 51 aa2.72□□□□□ -1.97
PPARGC1A-204ENST00000506055 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
PPARGC1A-204ENST00000506055 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
PPARGC1A-204ENST00000506055 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
PPARGC1A-204ENST00000506055 MT1LQ93083 61 aa2.63□□□□□ -1.99
PPARGC1A-204ENST00000506055 MT1EP04732 61 aa2.63□□□□□ -1.99
PPARGC1A-204ENST00000506055 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
PPARGC1A-204ENST00000506055 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
PPARGC1A-204ENST00000506055 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
PPARGC1A-204ENST00000506055 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
PPARGC1A-204ENST00000506055 KRTAP19-6Q3LI70 58 aa2.57□□□□□ -2
PPARGC1A-204ENST00000506055 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
PPARGC1A-204ENST00000506055 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
PPARGC1A-204ENST00000506055 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
PPARGC1A-204ENST00000506055 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
PPARGC1A-204ENST00000506055 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2.01
PPARGC1A-204ENST00000506055 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
PPARGC1A-204ENST00000506055 MT1GP13640 62 aa2.49□□□□□ -2.01
PPARGC1A-204ENST00000506055 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
PPARGC1A-204ENST00000506055 KRTAP19-3Q7Z4W3 81 aa2.46□□□□□ -2.02
PPARGC1A-204ENST00000506055 MT1MQ8N339 61 aa2.46□□□□□ -2.02
PPARGC1A-204ENST00000506055 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
PPARGC1A-204ENST00000506055 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.02
PPARGC1A-204ENST00000506055 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
PPARGC1A-204ENST00000506055 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PPARGC1A-204ENST00000506055 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
PPARGC1A-204ENST00000506055 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
PPARGC1A-204ENST00000506055 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
PPARGC1A-204ENST00000506055 NEBP20929 6669 aa2.29□□□□□ -2.04
PPARGC1A-204ENST00000506055 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
PPARGC1A-204ENST00000506055 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
PPARGC1A-204ENST00000506055 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
PPARGC1A-204ENST00000506055 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
PPARGC1A-204ENST00000506055 LCE1AQ5T7P2 110 aa2.21□□□□□ -2.06
PPARGC1A-204ENST00000506055 SPRR2EP22531 72 aa2.21□□□□□ -2.06
PPARGC1A-204ENST00000506055 SPRR2BP35325 72 aa2.21□□□□□ -2.06
PPARGC1A-204ENST00000506055 SPRR2AP35326 72 aa2.21□□□□□ -2.06
PPARGC1A-204ENST00000506055 MT1AP04731 61 aa2.19□□□□□ -2.06
PPARGC1A-204ENST00000506055 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
PPARGC1A-204ENST00000506055 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
PPARGC1A-204ENST00000506055 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
PPARGC1A-204ENST00000506055 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.06
PPARGC1A-204ENST00000506055 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
PPARGC1A-204ENST00000506055 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
PPARGC1A-204ENST00000506055 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
PPARGC1A-204ENST00000506055 SPRR2DP22532 72 aa2.12□□□□□ -2.07
PPARGC1A-204ENST00000506055 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
PPARGC1A-204ENST00000506055 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
PPARGC1A-204ENST00000506055 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
PPARGC1A-204ENST00000506055 PRM1P04553 51 aa2.04□□□□□ -2.08
PPARGC1A-204ENST00000506055 MT3P25713 68 aa2.03□□□□□ -2.09
PPARGC1A-204ENST00000506055 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.09
PPARGC1A-204ENST00000506055 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.09
PPARGC1A-204ENST00000506055 MT4P47944 62 aa1.91□□□□□ -2.1
PPARGC1A-204ENST00000506055 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
PPARGC1A-204ENST00000506055 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
PPARGC1A-204ENST00000506055 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
PPARGC1A-204ENST00000506055 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
PPARGC1A-204ENST00000506055 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
PPARGC1A-204ENST00000506055 LCE1CQ5T751 118 aa1.52□□□□□ -2.17
PPARGC1A-204ENST00000506055 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
PPARGC1A-204ENST00000506055 LCE1FQ5T754 118 aa1.36□□□□□ -2.19
PPARGC1A-204ENST00000506055 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
PPARGC1A-204ENST00000506055 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
PPARGC1A-204ENST00000506055 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
PPARGC1A-204ENST00000506055 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 7.2 ms