RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
BRIX1-202ENST00000506023 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
BRIX1-202ENST00000506023 CHKB-CPT1BH3BT56 60 aa3.49□□□□□ -1.85
BRIX1-202ENST00000506023 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
BRIX1-202ENST00000506023 SCGB1A1P11684 91 aa3.47□□□□□ -1.85
BRIX1-202ENST00000506023 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
BRIX1-202ENST00000506023 SPATA8Q6RVD6 105 aa3.47□□□□□ -1.85
BRIX1-202ENST00000506023 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
BRIX1-202ENST00000506023 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
BRIX1-202ENST00000506023 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
BRIX1-202ENST00000506023 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
BRIX1-202ENST00000506023 SNURFQ9Y675 71 aa3.42□□□□□ -1.86
BRIX1-202ENST00000506023 MT3P25713 68 aa3.39□□□□□ -1.87
BRIX1-202ENST00000506023 A0A1B0GV90 55 aa3.37□□□□□ -1.87
BRIX1-202ENST00000506023 SPANXA2-OT1Q8N9U9 137 aa3.34□□□□□ -1.87
BRIX1-202ENST00000506023 COA5Q86WW8 74 aa3.31□□□□□ -1.88
BRIX1-202ENST00000506023 A0A1B0GU33 70 aa3.3□□□□□ -1.88
BRIX1-202ENST00000506023 A8MU10 97 aa3.3□□□□□ -1.88
BRIX1-202ENST00000506023 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
BRIX1-202ENST00000506023 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
BRIX1-202ENST00000506023 SMIM20Q8N5G0 67 aa3.28□□□□□ -1.88
BRIX1-202ENST00000506023 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
BRIX1-202ENST00000506023 TNP1P09430 55 aa3.27□□□□□ -1.89
BRIX1-202ENST00000506023 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
BRIX1-202ENST00000506023 SERP1Q9Y6X1 66 aa3.26□□□□□ -1.89
BRIX1-202ENST00000506023 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
BRIX1-202ENST00000506023 J3QR89 54 aa3.25□□□□□ -1.89
BRIX1-202ENST00000506023 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
BRIX1-202ENST00000506023 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
BRIX1-202ENST00000506023 SEC61GP60059 68 aa3.22□□□□□ -1.89
BRIX1-202ENST00000506023 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
BRIX1-202ENST00000506023 SMIM26A0A096LP01 95 aa3.16□□□□□ -1.9
BRIX1-202ENST00000506023 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.9
BRIX1-202ENST00000506023 SERP2Q8N6R1 65 aa3.15□□□□□ -1.91
BRIX1-202ENST00000506023 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
BRIX1-202ENST00000506023 A0A1B0GU69 56 aa3.09□□□□□ -1.91
BRIX1-202ENST00000506023 MT1AP04731 61 aa3.09□□□□□ -1.91
BRIX1-202ENST00000506023 H7BZZ5 65 aa3.06□□□□□ -1.92
BRIX1-202ENST00000506023 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
BRIX1-202ENST00000506023 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
BRIX1-202ENST00000506023 K7ERU9 68 aa3.02□□□□□ -1.93
BRIX1-202ENST00000506023 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
BRIX1-202ENST00000506023 COX7CP15954 63 aa2.98□□□□□ -1.93
BRIX1-202ENST00000506023 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
BRIX1-202ENST00000506023 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
BRIX1-202ENST00000506023 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
BRIX1-202ENST00000506023 LINC01558Q9Y6Z2 57 aa2.85□□□□□ -1.95
BRIX1-202ENST00000506023 PRR15LQ9BU68 103 aa2.82□□□□□ -1.96
BRIX1-202ENST00000506023 UQCR11O14957 56 aa2.77□□□□□ -1.97
BRIX1-202ENST00000506023 CCDC179H3BU77 68 aa2.73□□□□□ -1.97
BRIX1-202ENST00000506023 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
BRIX1-202ENST00000506023 ANAPC13Q9BS18 74 aa2.66□□□□□ -1.98
BRIX1-202ENST00000506023 ATP5EP56381 51 aaPredicted RBP2.63□□□□□ -1.99
BRIX1-202ENST00000506023 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
BRIX1-202ENST00000506023 K7ERS5 55 aa2.59□□□□□ -1.99
BRIX1-202ENST00000506023 PSPHP1O15172 72 aa2.54□□□□□ -2
BRIX1-202ENST00000506023 RPS28P62857 69 aaKnown RBP2.53□□□□□ -2
BRIX1-202ENST00000506023 Q1T7F1 81 aa2.53□□□□□ -2
BRIX1-202ENST00000506023 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
BRIX1-202ENST00000506023 TMEM258P61165 79 aa2.49□□□□□ -2.01
BRIX1-202ENST00000506023 CDC42SE1Q9NRR8 79 aa2.49□□□□□ -2.01
BRIX1-202ENST00000506023 ROMO1P60602 79 aa2.47□□□□□ -2.01
BRIX1-202ENST00000506023 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
BRIX1-202ENST00000506023 A6NED7 52 aa2.36□□□□□ -2.03
BRIX1-202ENST00000506023 V9GYY9 64 aa2.34□□□□□ -2.03
BRIX1-202ENST00000506023 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
BRIX1-202ENST00000506023 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
BRIX1-202ENST00000506023 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
BRIX1-202ENST00000506023 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
BRIX1-202ENST00000506023 BRK1Q8WUW1 75 aa1.73□□□□□ -2.13
BRIX1-202ENST00000506023 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
BRIX1-202ENST00000506023 PMAIP1Q13794 54 aa1.6□□□□□ -2.15
BRIX1-202ENST00000506023 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
BRIX1-202ENST00000506023 LUZP6Q538Z0 58 aa1.36□□□□□ -2.19
BRIX1-202ENST00000506023 PRM1P04553 51 aa1.3□□□□□ -2.2
BRIX1-202ENST00000506023 KTN1-AS1Q86SY8 53 aa1.27□□□□□ -2.21
BRIX1-202ENST00000506023 PRO0628Q9UI54 55 aa1.24□□□□□ -2.21
BRIX1-202ENST00000506023 INE1O15225 51 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 141.2 ms