RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
AC012339.1-201ENST00000505564 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
AC012339.1-201ENST00000505564 LINC01558Q9Y6Z2 57 aa4.27□□□□□ -1.73
AC012339.1-201ENST00000505564 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
AC012339.1-201ENST00000505564 V9GYY9 64 aa4.21□□□□□ -1.74
AC012339.1-201ENST00000505564 UQCR11O14957 56 aa4.2□□□□□ -1.74
AC012339.1-201ENST00000505564 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
AC012339.1-201ENST00000505564 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
AC012339.1-201ENST00000505564 A8MU10 97 aa4.18□□□□□ -1.74
AC012339.1-201ENST00000505564 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
AC012339.1-201ENST00000505564 SPRR2EP22531 72 aa4.12□□□□□ -1.75
AC012339.1-201ENST00000505564 SPRR2BP35325 72 aa4.12□□□□□ -1.75
AC012339.1-201ENST00000505564 SPRR2AP35326 72 aa4.12□□□□□ -1.75
AC012339.1-201ENST00000505564 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
AC012339.1-201ENST00000505564 Q1T7F1 81 aa4.11□□□□□ -1.75
AC012339.1-201ENST00000505564 PSPHP1O15172 72 aa4.1□□□□□ -1.75
AC012339.1-201ENST00000505564 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
AC012339.1-201ENST00000505564 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
AC012339.1-201ENST00000505564 K7ERS5 55 aa4.09□□□□□ -1.75
AC012339.1-201ENST00000505564 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
AC012339.1-201ENST00000505564 RPS28P62857 69 aaKnown RBP4.05□□□□□ -1.76
AC012339.1-201ENST00000505564 TNP1P09430 55 aa4.04□□□□□ -1.76
AC012339.1-201ENST00000505564 A6NED7 52 aa4.01□□□□□ -1.77
AC012339.1-201ENST00000505564 SPRR2DP22532 72 aa4□□□□□ -1.77
AC012339.1-201ENST00000505564 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
AC012339.1-201ENST00000505564 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
AC012339.1-201ENST00000505564 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
AC012339.1-201ENST00000505564 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.79
AC012339.1-201ENST00000505564 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
AC012339.1-201ENST00000505564 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
AC012339.1-201ENST00000505564 MT1EP04732 61 aa3.88□□□□□ -1.79
AC012339.1-201ENST00000505564 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
AC012339.1-201ENST00000505564 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
AC012339.1-201ENST00000505564 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.79
AC012339.1-201ENST00000505564 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
AC012339.1-201ENST00000505564 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
AC012339.1-201ENST00000505564 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
AC012339.1-201ENST00000505564 MT1GP13640 62 aa3.79□□□□□ -1.8
AC012339.1-201ENST00000505564 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
AC012339.1-201ENST00000505564 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
AC012339.1-201ENST00000505564 ROMO1P60602 79 aa3.76□□□□□ -1.81
AC012339.1-201ENST00000505564 MT1LQ93083 61 aa3.74□□□□□ -1.81
AC012339.1-201ENST00000505564 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
AC012339.1-201ENST00000505564 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
AC012339.1-201ENST00000505564 MT1MQ8N339 61 aa3.69□□□□□ -1.82
AC012339.1-201ENST00000505564 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
AC012339.1-201ENST00000505564 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
AC012339.1-201ENST00000505564 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
AC012339.1-201ENST00000505564 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
AC012339.1-201ENST00000505564 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
AC012339.1-201ENST00000505564 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
AC012339.1-201ENST00000505564 MT4P47944 62 aa3.48□□□□□ -1.85
AC012339.1-201ENST00000505564 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
AC012339.1-201ENST00000505564 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
AC012339.1-201ENST00000505564 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
AC012339.1-201ENST00000505564 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
AC012339.1-201ENST00000505564 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
AC012339.1-201ENST00000505564 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
AC012339.1-201ENST00000505564 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
AC012339.1-201ENST00000505564 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
AC012339.1-201ENST00000505564 MT1AP04731 61 aa3.19□□□□□ -1.9
AC012339.1-201ENST00000505564 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
AC012339.1-201ENST00000505564 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
AC012339.1-201ENST00000505564 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
AC012339.1-201ENST00000505564 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
AC012339.1-201ENST00000505564 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
AC012339.1-201ENST00000505564 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
AC012339.1-201ENST00000505564 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
AC012339.1-201ENST00000505564 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
AC012339.1-201ENST00000505564 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
AC012339.1-201ENST00000505564 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
AC012339.1-201ENST00000505564 INE1O15225 51 aa2.38□□□□□ -2.03
AC012339.1-201ENST00000505564 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
AC012339.1-201ENST00000505564 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
AC012339.1-201ENST00000505564 PRM1P04553 51 aa1.91□□□□□ -2.1
AC012339.1-201ENST00000505564 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
AC012339.1-201ENST00000505564 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 106 ms