RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 KRTAP10-5P60370 271 aa1.56□□□□□ -2.16
ALYREF-201ENST00000504015 MT1XP80297 61 aa1.56□□□□□ -2.16
ALYREF-201ENST00000504015 LCE3AQ5TA76 89 aa1.56□□□□□ -2.16
ALYREF-201ENST00000504015 KRTAP9-3Q9BYQ3 159 aa1.56□□□□□ -2.16
ALYREF-201ENST00000504015 KRTAP10-12P60413 245 aa1.54□□□□□ -2.16
ALYREF-201ENST00000504015 DSTQ03001 7570 aaKnown RBP1.54□□□□□ -2.16
ALYREF-201ENST00000504015 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
ALYREF-201ENST00000504015 KRTAP12-3P60328 96 aa1.52□□□□□ -2.17
ALYREF-201ENST00000504015 KRTAP2-2Q9BYT5 123 aa1.52□□□□□ -2.17
ALYREF-201ENST00000504015 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
ALYREF-201ENST00000504015 KRTAP19-4Q3LI73 84 aa1.51□□□□□ -2.17
ALYREF-201ENST00000504015 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
ALYREF-201ENST00000504015 KRTAP10-7P60409 375 aaPredicted RBP1.48□□□□□ -2.17
ALYREF-201ENST00000504015 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
ALYREF-201ENST00000504015 LCE2BO14633 110 aa1.47□□□□□ -2.17
ALYREF-201ENST00000504015 INE1O15225 51 aa1.45□□□□□ -2.18
ALYREF-201ENST00000504015 KRTAP19-5Q3LI72 72 aa1.44□□□□□ -2.18
ALYREF-201ENST00000504015 LCE3CQ5T5A8 94 aa1.44□□□□□ -2.18
ALYREF-201ENST00000504015 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
ALYREF-201ENST00000504015 KRTAP5-3Q6L8H2 238 aa1.42□□□□□ -2.18
ALYREF-201ENST00000504015 KRTAP4-8Q9BYQ9 185 aa1.4□□□□□ -2.19
ALYREF-201ENST00000504015 KRTAP19-6Q3LI70 58 aa1.39□□□□□ -2.19
ALYREF-201ENST00000504015 KRTAP19-7Q3SYF9 63 aa1.39□□□□□ -2.19
ALYREF-201ENST00000504015 KRTAP4-8A0A0G2JLE6 195 aa1.38□□□□□ -2.19
ALYREF-201ENST00000504015 KRTAP5-9P26371 169 aa1.37□□□□□ -2.19
ALYREF-201ENST00000504015 KRTAP4-9Q9BYQ8 210 aa1.37□□□□□ -2.19
ALYREF-201ENST00000504015 MT1EP04732 61 aa1.35□□□□□ -2.19
ALYREF-201ENST00000504015 MT1LQ93083 61 aa1.35□□□□□ -2.19
ALYREF-201ENST00000504015 KRTAP4-7Q9BYR0 210 aa1.33□□□□□ -2.2
ALYREF-201ENST00000504015 KRTAP9-6A8MVA2 160 aa1.32□□□□□ -2.2
ALYREF-201ENST00000504015 KRTAP9-9Q9BYP9 154 aa1.32□□□□□ -2.2
ALYREF-201ENST00000504015 KRTAP9-4Q9BYQ2 154 aa1.32□□□□□ -2.2
ALYREF-201ENST00000504015 MT1GP13640 62 aa1.31□□□□□ -2.2
ALYREF-201ENST00000504015 SPRR2EP22531 72 aa1.3□□□□□ -2.2
ALYREF-201ENST00000504015 SPRR2BP35325 72 aa1.3□□□□□ -2.2
ALYREF-201ENST00000504015 SPRR2AP35326 72 aa1.3□□□□□ -2.2
ALYREF-201ENST00000504015 KRTAP4-2Q9BYR5 136 aa1.3□□□□□ -2.2
ALYREF-201ENST00000504015 KRTAP19-3Q7Z4W3 81 aa1.28□□□□□ -2.2
ALYREF-201ENST00000504015 LCE1DQ5T752 114 aa1.27□□□□□ -2.21
ALYREF-201ENST00000504015 LCE3BQ5TA77 95 aa1.27□□□□□ -2.21
ALYREF-201ENST00000504015 MT1MQ8N339 61 aa1.27□□□□□ -2.21
ALYREF-201ENST00000504015 SPRR2DP22532 72 aa1.26□□□□□ -2.21
ALYREF-201ENST00000504015 LCE5AQ5TCM9 118 aa1.25□□□□□ -2.21
ALYREF-201ENST00000504015 SPRR2FQ96RM1 72 aa1.22□□□□□ -2.21
ALYREF-201ENST00000504015 LCE1AQ5T7P2 110 aa1.2□□□□□ -2.22
ALYREF-201ENST00000504015 KRTAP5-4Q6L8H1 288 aa1.2□□□□□ -2.22
ALYREF-201ENST00000504015 KRTAP4-12Q9BQ66 201 aa1.2□□□□□ -2.22
ALYREF-201ENST00000504015 KRTAP4-3Q9BYR4 195 aa1.2□□□□□ -2.22
ALYREF-201ENST00000504015 MT1AP04731 61 aa1.18□□□□□ -2.22
ALYREF-201ENST00000504015 MT4P47944 62 aa1.16□□□□□ -2.22
ALYREF-201ENST00000504015 KRTAP12-4P60329 112 aa1.15□□□□□ -2.23
ALYREF-201ENST00000504015 KRTAP5-5Q701N2 237 aaPredicted RBP1.14□□□□□ -2.23
ALYREF-201ENST00000504015 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
ALYREF-201ENST00000504015 KRTAP4-11Q9BYQ6 195 aa1.12□□□□□ -2.23
ALYREF-201ENST00000504015 LCE3DQ9BYE3 92 aa1.11□□□□□ -2.23
ALYREF-201ENST00000504015 LCE3EQ5T5B0 92 aa1.1□□□□□ -2.23
ALYREF-201ENST00000504015 KRTAP5-8O75690 187 aa1.08□□□□□ -2.24
ALYREF-201ENST00000504015 MT3P25713 68 aa1.06□□□□□ -2.24
ALYREF-201ENST00000504015 LCE4AQ5TA78 99 aa1.05□□□□□ -2.24
ALYREF-201ENST00000504015 SYNE1Q8NF91 8797 aaKnown RBP1.04□□□□□ -2.24
ALYREF-201ENST00000504015 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
ALYREF-201ENST00000504015 PRM1P04553 51 aa1□□□□□ -2.25
ALYREF-201ENST00000504015 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.99□□□□□ -2.25
ALYREF-201ENST00000504015 KRTAP5-2Q701N4 177 aa0.99□□□□□ -2.25
ALYREF-201ENST00000504015 KRTAP20-2Q3LI61 65 aa0.94□□□□□ -2.26
ALYREF-201ENST00000504015 LCE1EQ5T753 118 aa0.91□□□□□ -2.26
ALYREF-201ENST00000504015 OBSCNQ5VST9 7968 aa0.91□□□□□ -2.26
ALYREF-201ENST00000504015 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
ALYREF-201ENST00000504015 LCE1CQ5T751 118 aa0.84□□□□□ -2.27
ALYREF-201ENST00000504015 LCE1BQ5T7P3 118 aa0.84□□□□□ -2.27
ALYREF-201ENST00000504015 KRTAP5-1Q6L8H4 278 aa0.82□□□□□ -2.28
ALYREF-201ENST00000504015 KRTAP4-4Q9BYR3 166 aa0.82□□□□□ -2.28
ALYREF-201ENST00000504015 KRTAP5-11Q6L8G4 156 aa0.77□□□□□ -2.29
ALYREF-201ENST00000504015 KRTAP21-2Q3LI59 83 aa0.74□□□□□ -2.29
ALYREF-201ENST00000504015 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
ALYREF-201ENST00000504015 MUC19Q7Z5P9 8384 aa0.65□□□□□ -2.31
ALYREF-201ENST00000504015 LCE1FQ5T754 118 aa0.64□□□□□ -2.31
ALYREF-201ENST00000504015 MUC16Q8WXI7 14507 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 87.9 ms