RNA–Protein interactions for RNA: ENST00000502686.6

CTCFL-211, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-211ENST00000502686 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
CTCFL-211ENST00000502686 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
CTCFL-211ENST00000502686 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
CTCFL-211ENST00000502686 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
CTCFL-211ENST00000502686 KRTAP5-3Q6L8H2 238 aa4.99□□□□□ -1.61
CTCFL-211ENST00000502686 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
CTCFL-211ENST00000502686 KRTAP9-7A8MTY7 169 aa4.95□□□□□ -1.62
CTCFL-211ENST00000502686 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
CTCFL-211ENST00000502686 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
CTCFL-211ENST00000502686 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
CTCFL-211ENST00000502686 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
CTCFL-211ENST00000502686 SPRR2FQ96RM1 72 aa4.83□□□□□ -1.64
CTCFL-211ENST00000502686 MT1EP04732 61 aa4.81□□□□□ -1.64
CTCFL-211ENST00000502686 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
CTCFL-211ENST00000502686 KRTAP6-3Q3LI67 103 aa4.81□□□□□ -1.64
CTCFL-211ENST00000502686 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
CTCFL-211ENST00000502686 MUC12Q9UKN1 5478 aa4.75□□□□□ -1.65
CTCFL-211ENST00000502686 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
CTCFL-211ENST00000502686 MT1LQ93083 61 aa4.68□□□□□ -1.66
CTCFL-211ENST00000502686 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
CTCFL-211ENST00000502686 MDN1Q9NU22 5596 aa4.65□□□□□ -1.66
CTCFL-211ENST00000502686 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
CTCFL-211ENST00000502686 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
CTCFL-211ENST00000502686 SPRR2EP22531 72 aa4.63□□□□□ -1.67
CTCFL-211ENST00000502686 SPRR2BP35325 72 aa4.63□□□□□ -1.67
CTCFL-211ENST00000502686 SPRR2AP35326 72 aa4.63□□□□□ -1.67
CTCFL-211ENST00000502686 NEBP20929 6669 aa4.62□□□□□ -1.67
CTCFL-211ENST00000502686 MT1GP13640 62 aa4.58□□□□□ -1.68
CTCFL-211ENST00000502686 MT1MQ8N339 61 aa4.53□□□□□ -1.68
CTCFL-211ENST00000502686 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
CTCFL-211ENST00000502686 SPRR2DP22532 72 aa4.46□□□□□ -1.69
CTCFL-211ENST00000502686 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.69
CTCFL-211ENST00000502686 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
CTCFL-211ENST00000502686 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
CTCFL-211ENST00000502686 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
CTCFL-211ENST00000502686 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
CTCFL-211ENST00000502686 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
CTCFL-211ENST00000502686 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
CTCFL-211ENST00000502686 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
CTCFL-211ENST00000502686 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
CTCFL-211ENST00000502686 INE1O15225 51 aa4□□□□□ -1.77
CTCFL-211ENST00000502686 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
CTCFL-211ENST00000502686 MT1AP04731 61 aa3.98□□□□□ -1.77
CTCFL-211ENST00000502686 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
CTCFL-211ENST00000502686 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
CTCFL-211ENST00000502686 MT4P47944 62 aa3.88□□□□□ -1.79
CTCFL-211ENST00000502686 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
CTCFL-211ENST00000502686 HMCN1Q96RW7 5635 aa3.78□□□□□ -1.8
CTCFL-211ENST00000502686 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
CTCFL-211ENST00000502686 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
CTCFL-211ENST00000502686 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
CTCFL-211ENST00000502686 MT3P25713 68 aa3.61□□□□□ -1.83
CTCFL-211ENST00000502686 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
CTCFL-211ENST00000502686 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
CTCFL-211ENST00000502686 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
CTCFL-211ENST00000502686 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
CTCFL-211ENST00000502686 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
CTCFL-211ENST00000502686 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
CTCFL-211ENST00000502686 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
CTCFL-211ENST00000502686 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
CTCFL-211ENST00000502686 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
CTCFL-211ENST00000502686 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
CTCFL-211ENST00000502686 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CTCFL-211ENST00000502686 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
CTCFL-211ENST00000502686 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
CTCFL-211ENST00000502686 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
CTCFL-211ENST00000502686 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
CTCFL-211ENST00000502686 PRM1P04553 51 aa3.02□□□□□ -1.93
CTCFL-211ENST00000502686 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
CTCFL-211ENST00000502686 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
CTCFL-211ENST00000502686 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
CTCFL-211ENST00000502686 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
CTCFL-211ENST00000502686 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -2
CTCFL-211ENST00000502686 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
CTCFL-211ENST00000502686 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
CTCFL-211ENST00000502686 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
CTCFL-211ENST00000502686 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 102.7 ms