RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
LMNA-217ENST00000498722 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
LMNA-217ENST00000498722 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
LMNA-217ENST00000498722 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
LMNA-217ENST00000498722 SPRR2DP22532 72 aa6.04□□□□□ -1.44
LMNA-217ENST00000498722 KRTAP2-2Q9BYT5 123 aa6□□□□□ -1.45
LMNA-217ENST00000498722 KRTAP2-1Q9BYU5 128 aa6□□□□□ -1.45
LMNA-217ENST00000498722 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
LMNA-217ENST00000498722 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
LMNA-217ENST00000498722 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
LMNA-217ENST00000498722 MT1EP04732 61 aa5.95□□□□□ -1.46
LMNA-217ENST00000498722 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
LMNA-217ENST00000498722 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
LMNA-217ENST00000498722 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
LMNA-217ENST00000498722 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
LMNA-217ENST00000498722 MT1GP13640 62 aa5.74□□□□□ -1.49
LMNA-217ENST00000498722 MT1LQ93083 61 aa5.73□□□□□ -1.49
LMNA-217ENST00000498722 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
LMNA-217ENST00000498722 GPR98Q8WXG9 6306 aa5.67□□□□□ -1.5
LMNA-217ENST00000498722 MT1MQ8N339 61 aa5.66□□□□□ -1.5
LMNA-217ENST00000498722 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
LMNA-217ENST00000498722 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
LMNA-217ENST00000498722 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
LMNA-217ENST00000498722 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
LMNA-217ENST00000498722 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
LMNA-217ENST00000498722 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
LMNA-217ENST00000498722 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
LMNA-217ENST00000498722 NDUFAF8A1L188 74 aa5.35□□□□□ -1.55
LMNA-217ENST00000498722 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
LMNA-217ENST00000498722 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
LMNA-217ENST00000498722 MT4P47944 62 aa5.28□□□□□ -1.56
LMNA-217ENST00000498722 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
LMNA-217ENST00000498722 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
LMNA-217ENST00000498722 HMCN1Q96RW7 5635 aa5.2□□□□□ -1.58
LMNA-217ENST00000498722 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
LMNA-217ENST00000498722 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
LMNA-217ENST00000498722 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
LMNA-217ENST00000498722 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
LMNA-217ENST00000498722 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
LMNA-217ENST00000498722 KRTAP12-4P60329 112 aa5□□□□□ -1.61
LMNA-217ENST00000498722 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
LMNA-217ENST00000498722 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
LMNA-217ENST00000498722 MT1AP04731 61 aa4.88□□□□□ -1.63
LMNA-217ENST00000498722 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
LMNA-217ENST00000498722 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
LMNA-217ENST00000498722 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
LMNA-217ENST00000498722 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
LMNA-217ENST00000498722 H3BS24 57 aa4.73□□□□□ -1.65
LMNA-217ENST00000498722 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
LMNA-217ENST00000498722 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
LMNA-217ENST00000498722 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
LMNA-217ENST00000498722 INE1O15225 51 aa4.49□□□□□ -1.69
LMNA-217ENST00000498722 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.69
LMNA-217ENST00000498722 MT3P25713 68 aa4.46□□□□□ -1.7
LMNA-217ENST00000498722 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
LMNA-217ENST00000498722 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
LMNA-217ENST00000498722 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
LMNA-217ENST00000498722 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
LMNA-217ENST00000498722 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
LMNA-217ENST00000498722 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
LMNA-217ENST00000498722 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
LMNA-217ENST00000498722 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
LMNA-217ENST00000498722 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
LMNA-217ENST00000498722 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
LMNA-217ENST00000498722 LCE1EQ5T753 118 aa4□□□□□ -1.77
LMNA-217ENST00000498722 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
LMNA-217ENST00000498722 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
LMNA-217ENST00000498722 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
LMNA-217ENST00000498722 PRM1P04553 51 aa3.57□□□□□ -1.84
LMNA-217ENST00000498722 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
LMNA-217ENST00000498722 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
LMNA-217ENST00000498722 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
LMNA-217ENST00000498722 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
LMNA-217ENST00000498722 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
LMNA-217ENST00000498722 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
LMNA-217ENST00000498722 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
LMNA-217ENST00000498722 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
LMNA-217ENST00000498722 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 136.3 ms