RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 LENEPQ9Y5L5 61 aa0.57□□□□□ -2.32
XRN1-214ENST00000498077 PRO2289Q9P1D8 64 aa0.56□□□□□ -2.32
XRN1-214ENST00000498077 NDUFA2O43678 99 aa0.56□□□□□ -2.32
XRN1-214ENST00000498077 A6NN06 94 aa0.56□□□□□ -2.32
XRN1-214ENST00000498077 ATP5EP56381 51 aaPredicted RBP0.56□□□□□ -2.32
XRN1-214ENST00000498077 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
XRN1-214ENST00000498077 DOCK4Q8N1I0 1966 aa0.55□□□□□ -2.32
XRN1-214ENST00000498077 LSM6P62312 80 aaKnown RBP0.55□□□□□ -2.32
XRN1-214ENST00000498077 MMP24-AS1A0A0U1RRL7 71 aa0.55□□□□□ -2.32
XRN1-214ENST00000498077 PKIAP61925 76 aa0.55□□□□□ -2.32
XRN1-214ENST00000498077 DNAH8Q96JB1 4490 aa0.55□□□□□ -2.32
XRN1-214ENST00000498077 F8WDY8 70 aa0.55□□□□□ -2.32
XRN1-214ENST00000498077 SNRPGP62308 76 aaKnown RBP0.54□□□□□ -2.32
XRN1-214ENST00000498077 LINC01558Q9Y6Z2 57 aa0.54□□□□□ -2.32
XRN1-214ENST00000498077 PRCDQ00LT1 54 aa0.54□□□□□ -2.32
XRN1-214ENST00000498077 SPRR2FQ96RM1 72 aa0.54□□□□□ -2.32
XRN1-214ENST00000498077 H3BUX3 64 aa0.54□□□□□ -2.32
XRN1-214ENST00000498077 MUC12Q9UKN1 5478 aa0.53□□□□□ -2.32
XRN1-214ENST00000498077 H0YGX0 51 aa0.53□□□□□ -2.32
XRN1-214ENST00000498077 RPS29P62273 56 aaKnown RBP0.53□□□□□ -2.32
XRN1-214ENST00000498077 LINC00643Q86TS7 51 aa0.53□□□□□ -2.33
XRN1-214ENST00000498077 RPL39P62891 51 aaKnown RBP0.52□□□□□ -2.33
XRN1-214ENST00000498077 LPAP08519 4548 aa0.52□□□□□ -2.33
XRN1-214ENST00000498077 CRIP1P50238 77 aa0.52□□□□□ -2.33
XRN1-214ENST00000498077 MT4P47944 62 aa0.51□□□□□ -2.33
XRN1-214ENST00000498077 KRTAP19-7Q3SYF9 63 aa0.51□□□□□ -2.33
XRN1-214ENST00000498077 CYP4F30PQ9H0H9 118 aa0.51□□□□□ -2.33
XRN1-214ENST00000498077 SPANXA1Q9NS26 97 aa0.51□□□□□ -2.33
XRN1-214ENST00000498077 SPANXCQ9NY87 97 aa0.51□□□□□ -2.33
XRN1-214ENST00000498077 NCOR1P1Q9H4R4 102 aa0.5□□□□□ -2.33
XRN1-214ENST00000498077 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
XRN1-214ENST00000498077 WT1-ASQ06250 92 aa0.5□□□□□ -2.33
XRN1-214ENST00000498077 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
XRN1-214ENST00000498077 HMGN3Q15651 99 aa0.5□□□□□ -2.33
XRN1-214ENST00000498077 RPL39LQ96EH5 51 aaKnown RBP0.5□□□□□ -2.33
XRN1-214ENST00000498077 OCC1Q8TAD7 63 aa0.49□□□□□ -2.33
XRN1-214ENST00000498077 MPC2O95563 127 aa0.49□□□□□ -2.33
XRN1-214ENST00000498077 G3V318 75 aa0.48□□□□□ -2.33
XRN1-214ENST00000498077 SPANXDQ9BXN6 97 aa0.47□□□□□ -2.33
XRN1-214ENST00000498077 RPL39P5Q59GN2 51 aa0.47□□□□□ -2.33
XRN1-214ENST00000498077 KRTAP8-1Q8IUC2 63 aa0.47□□□□□ -2.33
XRN1-214ENST00000498077 A0A087WWC5 75 aa0.47□□□□□ -2.33
XRN1-214ENST00000498077 KRTAP19-2Q3LHN2 52 aa0.46□□□□□ -2.34
XRN1-214ENST00000498077 A0A1B0GW54 56 aa0.46□□□□□ -2.34
XRN1-214ENST00000498077 LINC01590Q5TEZ4 76 aa0.46□□□□□ -2.34
XRN1-214ENST00000498077 TCHHQ07283 1943 aa0.45□□□□□ -2.34
XRN1-214ENST00000498077 MT2AP02795 61 aa0.45□□□□□ -2.34
XRN1-214ENST00000498077 ATP5EP2Q5VTU8 51 aa0.45□□□□□ -2.34
XRN1-214ENST00000498077 KRTAP12-4P60329 112 aa0.44□□□□□ -2.34
XRN1-214ENST00000498077 Q5VV11 94 aa0.44□□□□□ -2.34
XRN1-214ENST00000498077 LOC110117498A0A087WWA1 95 aa0.44□□□□□ -2.34
XRN1-214ENST00000498077 INE1O15225 51 aa0.43□□□□□ -2.34
XRN1-214ENST00000498077 MT1FP04733 61 aa0.43□□□□□ -2.34
XRN1-214ENST00000498077 CYSTM1Q9H1C7 97 aa0.42□□□□□ -2.34
XRN1-214ENST00000498077 PRM1P04553 51 aa0.41□□□□□ -2.34
XRN1-214ENST00000498077 PYY3Q5JQD4 70 aa0.41□□□□□ -2.34
XRN1-214ENST00000498077 KRTAP4-1Q9BYQ7 146 aa0.39□□□□□ -2.35
XRN1-214ENST00000498077 KRTAP21-2Q3LI59 83 aa0.38□□□□□ -2.35
XRN1-214ENST00000498077 MT1BP07438 61 aa0.37□□□□□ -2.35
XRN1-214ENST00000498077 MT1GP13640 62 aa0.35□□□□□ -2.35
XRN1-214ENST00000498077 DEFB114Q30KQ6 69 aa0.34□□□□□ -2.35
XRN1-214ENST00000498077 MUC16Q8WXI7 14507 aa0.34□□□□□ -2.35
XRN1-214ENST00000498077 C18orf32Q8TCD1 76 aa0.34□□□□□ -2.36
XRN1-214ENST00000498077 LOC105371267A0A1B0GV96 52 aa0.33□□□□□ -2.36
XRN1-214ENST00000498077 KRTAP6-1Q3LI64 71 aa0.32□□□□□ -2.36
XRN1-214ENST00000498077 KRTAP19-3Q7Z4W3 81 aa0.32□□□□□ -2.36
XRN1-214ENST00000498077 CMC2Q9NRP2 79 aa0.32□□□□□ -2.36
XRN1-214ENST00000498077 MORN2Q502X0 79 aa0.32□□□□□ -2.36
XRN1-214ENST00000498077 MT1MQ8N339 61 aa0.27□□□□□ -2.37
XRN1-214ENST00000498077 KRTAP19-5Q3LI72 72 aa0.23□□□□□ -2.37
XRN1-214ENST00000498077 KCNQ1DNQ9H478 68 aa0.21□□□□□ -2.38
XRN1-214ENST00000498077 MT1EP04732 61 aa0.21□□□□□ -2.38
XRN1-214ENST00000498077 KRTAP6-2Q3LI66 62 aa0.21□□□□□ -2.38
XRN1-214ENST00000498077 K7EIM0 57 aa0.18□□□□□ -2.38
XRN1-214ENST00000498077 MT1AP04731 61 aa0.18□□□□□ -2.38
XRN1-214ENST00000498077 MT1XP80297 61 aa0.16□□□□□ -2.38
XRN1-214ENST00000498077 IGIPA6NJ69 53 aa0.15□□□□□ -2.39
XRN1-214ENST00000498077 MT1LQ93083 61 aa0.12□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 129.7 ms