RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 NDUFB1O75438 58 aa2.04□□□□□ -2.08
BRCA1-224ENST00000497488 C10orf95Q9H7T3 257 aa2.03□□□□□ -2.08
BRCA1-224ENST00000497488 A0A0D9SG42 100 aa2.01□□□□□ -2.09
BRCA1-224ENST00000497488 MT1HP80294 61 aa2.01□□□□□ -2.09
BRCA1-224ENST00000497488 ATXN8Q156A1 80 aa1.99□□□□□ -2.09
BRCA1-224ENST00000497488 FLGP20930 4061 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-224ENST00000497488 TP53AIP1Q9HCN2 124 aa1.97□□□□□ -2.09
BRCA1-224ENST00000497488 COX6B2Q6YFQ2 88 aa1.96□□□□□ -2.1
BRCA1-224ENST00000497488 NREPQ16612 68 aa1.95□□□□□ -2.1
BRCA1-224ENST00000497488 FSIP2Q5CZC0 6907 aa1.94□□□□□ -2.1
BRCA1-224ENST00000497488 M0R2T5 61 aa1.94□□□□□ -2.1
BRCA1-224ENST00000497488 USH2AO75445 5202 aa1.94□□□□□ -2.1
BRCA1-224ENST00000497488 MMP24-AS1A0A0U1RRL7 71 aa1.92□□□□□ -2.1
BRCA1-224ENST00000497488 K7EQZ3 153 aa1.92□□□□□ -2.1
BRCA1-224ENST00000497488 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
BRCA1-224ENST00000497488 MRPL34Q9BQ48 92 aaKnown RBP1.9□□□□□ -2.11
BRCA1-224ENST00000497488 MT2AP02795 61 aa1.89□□□□□ -2.11
BRCA1-224ENST00000497488 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
BRCA1-224ENST00000497488 MT1FP04733 61 aa1.88□□□□□ -2.11
BRCA1-224ENST00000497488 WFDC13Q8IUB5 93 aa1.88□□□□□ -2.11
BRCA1-224ENST00000497488 UBL5Q9BZL1 73 aa1.86□□□□□ -2.11
BRCA1-224ENST00000497488 CRIPTQ9P021 101 aa1.85□□□□□ -2.11
BRCA1-224ENST00000497488 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-224ENST00000497488 H1FX-AS1Q4G0G2 97 aa1.82□□□□□ -2.12
BRCA1-224ENST00000497488 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
BRCA1-224ENST00000497488 KRTAP19-6Q3LI70 58 aa1.76□□□□□ -2.13
BRCA1-224ENST00000497488 S4R3F8 94 aa1.76□□□□□ -2.13
BRCA1-224ENST00000497488 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
BRCA1-224ENST00000497488 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
BRCA1-224ENST00000497488 MT1BP07438 61 aa1.73□□□□□ -2.13
BRCA1-224ENST00000497488 SPRR2GQ9BYE4 73 aa1.71□□□□□ -2.14
BRCA1-224ENST00000497488 KRTAP19-8Q3LI54 63 aa1.7□□□□□ -2.14
BRCA1-224ENST00000497488 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
BRCA1-224ENST00000497488 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
BRCA1-224ENST00000497488 SYNE2Q8WXH0 6885 aaKnown RBP1.69□□□□□ -2.14
BRCA1-224ENST00000497488 H0YAA0 97 aa1.68□□□□□ -2.14
BRCA1-224ENST00000497488 MUC12Q9UKN1 5478 aa1.67□□□□□ -2.14
BRCA1-224ENST00000497488 KMT2DO14686 5537 aa1.65□□□□□ -2.15
BRCA1-224ENST00000497488 MT1XP80297 61 aa1.63□□□□□ -2.15
BRCA1-224ENST00000497488 MDN1Q9NU22 5596 aa1.62□□□□□ -2.15
BRCA1-224ENST00000497488 M0QZ58 72 aa1.61□□□□□ -2.15
BRCA1-224ENST00000497488 NEBP20929 6669 aa1.58□□□□□ -2.16
BRCA1-224ENST00000497488 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
BRCA1-224ENST00000497488 SPRR2FQ96RM1 72 aa1.54□□□□□ -2.16
BRCA1-224ENST00000497488 SPRR2EP22531 72 aa1.52□□□□□ -2.17
BRCA1-224ENST00000497488 SPRR2BP35325 72 aa1.52□□□□□ -2.17
BRCA1-224ENST00000497488 SPRR2AP35326 72 aa1.52□□□□□ -2.17
BRCA1-224ENST00000497488 KRTAP20-1Q3LI63 56 aa1.51□□□□□ -2.17
BRCA1-224ENST00000497488 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
BRCA1-224ENST00000497488 KRTAP2-3P0C7H8 128 aa1.46□□□□□ -2.18
BRCA1-224ENST00000497488 SPRR2DP22532 72 aa1.46□□□□□ -2.18
BRCA1-224ENST00000497488 KRTAP19-7Q3SYF9 63 aa1.46□□□□□ -2.18
BRCA1-224ENST00000497488 KRTAP2-4Q9BYR9 128 aa1.46□□□□□ -2.18
BRCA1-224ENST00000497488 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
BRCA1-224ENST00000497488 MT1EP04732 61 aa1.43□□□□□ -2.18
BRCA1-224ENST00000497488 KRTAP19-5Q3LI72 72 aa1.42□□□□□ -2.18
BRCA1-224ENST00000497488 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
BRCA1-224ENST00000497488 DSTQ03001 7570 aaKnown RBP1.41□□□□□ -2.18
BRCA1-224ENST00000497488 MT1LQ93083 61 aa1.37□□□□□ -2.19
BRCA1-224ENST00000497488 TNP1P09430 55 aa1.36□□□□□ -2.19
BRCA1-224ENST00000497488 MT1MQ8N339 61 aa1.36□□□□□ -2.19
BRCA1-224ENST00000497488 MT1GP13640 62 aa1.35□□□□□ -2.19
BRCA1-224ENST00000497488 MT4P47944 62 aa1.29□□□□□ -2.2
BRCA1-224ENST00000497488 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
BRCA1-224ENST00000497488 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
BRCA1-224ENST00000497488 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
BRCA1-224ENST00000497488 KRTAP20-2Q3LI61 65 aa1.21□□□□□ -2.22
BRCA1-224ENST00000497488 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
BRCA1-224ENST00000497488 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
BRCA1-224ENST00000497488 MT1AP04731 61 aa1.16□□□□□ -2.22
BRCA1-224ENST00000497488 KRTAP6-2Q3LI66 62 aa1.1□□□□□ -2.23
BRCA1-224ENST00000497488 AHNAKQ09666 5890 aaKnown RBP1.03□□□□□ -2.24
BRCA1-224ENST00000497488 PRM1P04553 51 aa1.03□□□□□ -2.24
BRCA1-224ENST00000497488 MUC5ACP98088 5654 aa1.03□□□□□ -2.25
BRCA1-224ENST00000497488 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
BRCA1-224ENST00000497488 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
BRCA1-224ENST00000497488 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
BRCA1-224ENST00000497488 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 74.6 ms