RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
SMC4-226ENST00000497311 PRR15LQ9BU68 103 aa6.44□□□□□ -1.38
SMC4-226ENST00000497311 PSPHP1O15172 72 aa6.4□□□□□ -1.38
SMC4-226ENST00000497311 MT1EP04732 61 aa6.4□□□□□ -1.38
SMC4-226ENST00000497311 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
SMC4-226ENST00000497311 KRTAP12-1P59990 96 aa6.37□□□□□ -1.39
SMC4-226ENST00000497311 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
SMC4-226ENST00000497311 GPR98Q8WXG9 6306 aa6.31□□□□□ -1.4
SMC4-226ENST00000497311 A8MU10 97 aa6.27□□□□□ -1.41
SMC4-226ENST00000497311 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
SMC4-226ENST00000497311 A6NED7 52 aa6.25□□□□□ -1.41
SMC4-226ENST00000497311 UQCR11O14957 56 aa6.23□□□□□ -1.41
SMC4-226ENST00000497311 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
SMC4-226ENST00000497311 MT1GP13640 62 aa6.22□□□□□ -1.41
SMC4-226ENST00000497311 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
SMC4-226ENST00000497311 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
SMC4-226ENST00000497311 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
SMC4-226ENST00000497311 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
SMC4-226ENST00000497311 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
SMC4-226ENST00000497311 MT1MQ8N339 61 aa6.11□□□□□ -1.43
SMC4-226ENST00000497311 MT1LQ93083 61 aa6.08□□□□□ -1.44
SMC4-226ENST00000497311 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
SMC4-226ENST00000497311 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
SMC4-226ENST00000497311 MT4P47944 62 aa6.05□□□□□ -1.44
SMC4-226ENST00000497311 TNP1P09430 55 aa6.03□□□□□ -1.44
SMC4-226ENST00000497311 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
SMC4-226ENST00000497311 LCE3AQ5TA76 89 aa6□□□□□ -1.45
SMC4-226ENST00000497311 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.46
SMC4-226ENST00000497311 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
SMC4-226ENST00000497311 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
SMC4-226ENST00000497311 K7ERS5 55 aa5.93□□□□□ -1.46
SMC4-226ENST00000497311 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
SMC4-226ENST00000497311 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
SMC4-226ENST00000497311 KRTAP5-10Q6L8G5 202 aa5.79□□□□□ -1.48
SMC4-226ENST00000497311 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
SMC4-226ENST00000497311 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
SMC4-226ENST00000497311 SVIPQ8NHG7 77 aa5.73□□□□□ -1.49
SMC4-226ENST00000497311 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
SMC4-226ENST00000497311 ROMO1P60602 79 aa5.63□□□□□ -1.51
SMC4-226ENST00000497311 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
SMC4-226ENST00000497311 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
SMC4-226ENST00000497311 KRTAP5-7Q6L8G8 165 aa5.59□□□□□ -1.51
SMC4-226ENST00000497311 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
SMC4-226ENST00000497311 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
SMC4-226ENST00000497311 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
SMC4-226ENST00000497311 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
SMC4-226ENST00000497311 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
SMC4-226ENST00000497311 MT1AP04731 61 aa5.17□□□□□ -1.58
SMC4-226ENST00000497311 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
SMC4-226ENST00000497311 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
SMC4-226ENST00000497311 KRTAP5-8O75690 187 aa5□□□□□ -1.61
SMC4-226ENST00000497311 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
SMC4-226ENST00000497311 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
SMC4-226ENST00000497311 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
SMC4-226ENST00000497311 AHNAKQ09666 5890 aaKnown RBP4.93□□□□□ -1.62
SMC4-226ENST00000497311 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
SMC4-226ENST00000497311 MUC5ACP98088 5654 aa4.88□□□□□ -1.63
SMC4-226ENST00000497311 MT3P25713 68 aa4.76□□□□□ -1.65
SMC4-226ENST00000497311 KRTAP5-11Q6L8G4 156 aa4.76□□□□□ -1.65
SMC4-226ENST00000497311 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
SMC4-226ENST00000497311 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
SMC4-226ENST00000497311 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
SMC4-226ENST00000497311 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
SMC4-226ENST00000497311 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
SMC4-226ENST00000497311 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
SMC4-226ENST00000497311 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
SMC4-226ENST00000497311 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
SMC4-226ENST00000497311 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
SMC4-226ENST00000497311 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
SMC4-226ENST00000497311 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
SMC4-226ENST00000497311 INE1O15225 51 aa3.72□□□□□ -1.81
SMC4-226ENST00000497311 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SMC4-226ENST00000497311 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
SMC4-226ENST00000497311 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
SMC4-226ENST00000497311 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
SMC4-226ENST00000497311 PRM1P04553 51 aa2.9□□□□□ -1.95
SMC4-226ENST00000497311 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
SMC4-226ENST00000497311 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms