RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 EEA1Q15075 1411 aa-0.91□□□□□ -2.56
SMC4-225ENST00000497203 ABCA6Q8N139 1617 aa-0.93□□□□□ -2.56
SMC4-225ENST00000497203 ALS2Q96Q42 1657 aa-0.93□□□□□ -2.56
SMC4-225ENST00000497203 TTTY10Q9BZA0 68 aa-0.93□□□□□ -2.56
SMC4-225ENST00000497203 EFCAB6Q5THR3 1501 aa-0.94□□□□□ -2.56
SMC4-225ENST00000497203 LEAP2Q969E1 77 aa-0.95□□□□□ -2.56
SMC4-225ENST00000497203 UGGT1Q9NYU2 1555 aa-0.96□□□□□ -2.56
SMC4-225ENST00000497203 KIF21BO75037 1637 aa-0.97□□□□□ -2.56
SMC4-225ENST00000497203 NRXN3Q9Y4C0 1643 aa-0.97□□□□□ -2.56
SMC4-225ENST00000497203 DEFB131AP59861 70 aa-0.97□□□□□ -2.56
SMC4-225ENST00000497203 H0YGX0 51 aa-0.98□□□□□ -2.57
SMC4-225ENST00000497203 POLR2KP53803 58 aaKnown RBP-0.98□□□□□ -2.57
SMC4-225ENST00000497203 EFCAB5A4FU69 1503 aa-0.99□□□□□ -2.57
SMC4-225ENST00000497203 CCDC180Q9P1Z9 1646 aa-1□□□□□ -2.57
SMC4-225ENST00000497203 IGIPA6NJ69 53 aa-1□□□□□ -2.57
SMC4-225ENST00000497203 DEFB104AQ8WTQ1 72 aa-1□□□□□ -2.57
SMC4-225ENST00000497203 MROH2AA6NES4 1674 aa-1.02□□□□□ -2.57
SMC4-225ENST00000497203 ABCA10Q8WWZ4 1543 aa-1.02□□□□□ -2.57
SMC4-225ENST00000497203 CPS1P31327 1500 aa-1.03□□□□□ -2.57
SMC4-225ENST00000497203 PLNP26678 52 aa-1.03□□□□□ -2.57
SMC4-225ENST00000497203 A0A087WWC5 75 aa-1.04□□□□□ -2.58
SMC4-225ENST00000497203 LMO7Q8WWI1 1683 aa-1.04□□□□□ -2.58
SMC4-225ENST00000497203 AGLP35573 1532 aa-1.05□□□□□ -2.58
SMC4-225ENST00000497203 SYCP2Q9BX26 1530 aa-1.05□□□□□ -2.58
SMC4-225ENST00000497203 SMIM5Q71RC9 77 aa-1.05□□□□□ -2.58
SMC4-225ENST00000497203 SCRIBQ14160 1630 aa-1.07□□□□□ -2.58
SMC4-225ENST00000497203 ABCA5Q8WWZ7 1642 aa-1.08□□□□□ -2.58
SMC4-225ENST00000497203 TFF3Q07654 80 aa-1.1□□□□□ -2.59
SMC4-225ENST00000497203 DEFB133Q30KQ1 61 aa-1.11□□□□□ -2.59
SMC4-225ENST00000497203 SMIM2Q9BVW6 85 aa-1.11□□□□□ -2.59
SMC4-225ENST00000497203 PRXQ9BXM0 1461 aa-1.12□□□□□ -2.59
SMC4-225ENST00000497203 CD52P31358 61 aa-1.13□□□□□ -2.59
SMC4-225ENST00000497203 TRPM2O94759 1503 aa-1.14□□□□□ -2.59
SMC4-225ENST00000497203 CLTCL1P53675 1640 aa-1.14□□□□□ -2.59
SMC4-225ENST00000497203 NFAT5O94916 1531 aa-1.15□□□□□ -2.59
SMC4-225ENST00000497203 HTN1P15515 57 aa-1.15□□□□□ -2.59
SMC4-225ENST00000497203 A0A096LNI7 61 aa-1.16□□□□□ -2.6
SMC4-225ENST00000497203 ADCY10Q96PN6 1610 aa-1.16□□□□□ -2.6
SMC4-225ENST00000497203 LINC01556Q5JQF7 62 aa-1.17□□□□□ -2.6
SMC4-225ENST00000497203 ABCC8Q09428 1581 aa-1.17□□□□□ -2.6
SMC4-225ENST00000497203 CMC2Q9NRP2 79 aa-1.18□□□□□ -2.6
SMC4-225ENST00000497203 DDX60Q8IY21 1712 aaKnown RBP-1.18□□□□□ -2.6
SMC4-225ENST00000497203 IQGAP1P46940 1657 aa-1.19□□□□□ -2.6
SMC4-225ENST00000497203 FANCD2Q9BXW9 1451 aa-1.19□□□□□ -2.6
SMC4-225ENST00000497203 RHPN1-AS1Q9BWJ2 59 aa-1.21□□□□□ -2.6
SMC4-225ENST00000497203 NDUFA1O15239 70 aa-1.22□□□□□ -2.6
SMC4-225ENST00000497203 DEFB124Q8NES8 71 aa-1.22□□□□□ -2.6
SMC4-225ENST00000497203 TOMM7Q9P0U1 55 aa-1.24□□□□□ -2.61
SMC4-225ENST00000497203 SMIM31A0A1B0GVY4 71 aa-1.26□□□□□ -2.61
SMC4-225ENST00000497203 APELAP0DMC3 54 aa-1.26□□□□□ -2.61
SMC4-225ENST00000497203 HTN3P15516 51 aa-1.28□□□□□ -2.61
SMC4-225ENST00000497203 LINC01590Q5TEZ4 76 aa-1.28□□□□□ -2.61
SMC4-225ENST00000497203 A0A096LPF7 62 aa-1.29□□□□□ -2.62
SMC4-225ENST00000497203 H3BSH0 61 aa-1.3□□□□□ -2.62
SMC4-225ENST00000497203 ERICH3Q5RHP9 1530 aa-1.33□□□□□ -2.62
SMC4-225ENST00000497203 DUOX1Q9NRD9 1551 aa-1.37□□□□□ -2.63
SMC4-225ENST00000497203 TOP2AP11388 1531 aaKnown RBP-1.39□□□□□ -2.63
SMC4-225ENST00000497203 ATP7AQ04656 1500 aa-1.39□□□□□ -2.63
SMC4-225ENST00000497203 H3BUX3 64 aa-1.39□□□□□ -2.63
SMC4-225ENST00000497203 STATHP02808 62 aa-1.39□□□□□ -2.63
SMC4-225ENST00000497203 SAMD9LQ8IVG5 1584 aa-1.39□□□□□ -2.63
SMC4-225ENST00000497203 SNRPGP15A8MWD9 76 aa-1.41□□□□□ -2.64
SMC4-225ENST00000497203 DEFB108BQ8NET1 73 aa-1.42□□□□□ -2.64
SMC4-225ENST00000497203 RPL39P62891 51 aaKnown RBP-1.44□□□□□ -2.64
SMC4-225ENST00000497203 DEFB108AA8MXU0 73 aa-1.45□□□□□ -2.64
SMC4-225ENST00000497203 RPL39LQ96EH5 51 aaKnown RBP-1.45□□□□□ -2.64
SMC4-225ENST00000497203 IQGAP2Q13576 1575 aa-1.46□□□□□ -2.64
SMC4-225ENST00000497203 COX14Q96I36 57 aa-1.46□□□□□ -2.64
SMC4-225ENST00000497203 PRCDQ00LT1 54 aa-1.47□□□□□ -2.64
SMC4-225ENST00000497203 TMEM167AQ8TBQ9 72 aa-1.47□□□□□ -2.64
SMC4-225ENST00000497203 MROH2BQ7Z745 1585 aa-1.48□□□□□ -2.65
SMC4-225ENST00000497203 K7EIM0 57 aa-1.49□□□□□ -2.65
SMC4-225ENST00000497203 Q9Y3F1 56 aa-1.49□□□□□ -2.65
SMC4-225ENST00000497203 TOMM5Q8N4H5 51 aa-1.52□□□□□ -2.65
SMC4-225ENST00000497203 ARHGAP5-AS1Q96IT6 56 aa-1.54□□□□□ -2.66
SMC4-225ENST00000497203 RPL39P5Q59GN2 51 aa-1.57□□□□□ -2.66
SMC4-225ENST00000497203 GCC2Q8IWJ2 1684 aa-1.63□□□□□ -2.67
SMC4-225ENST00000497203 SNRPGP62308 76 aaKnown RBP-1.65□□□□□ -2.67
Retrieved 78 of 20,778 RNA–protein pairs in 857.7 ms