RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 TAX1BP3O14907 124 aa1.29□□□□□ -2.2
MDM2-220ENST00000496959 MT-ATP8P03928 68 aa1.29□□□□□ -2.2
MDM2-220ENST00000496959 PMAIP1Q13794 54 aa1.29□□□□□ -2.2
MDM2-220ENST00000496959 LINC01554Q52M75 96 aa1.29□□□□□ -2.2
MDM2-220ENST00000496959 ATP5EP2Q5VTU8 51 aa1.28□□□□□ -2.2
MDM2-220ENST00000496959 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
MDM2-220ENST00000496959 KRTAP19-3Q7Z4W3 81 aa1.28□□□□□ -2.2
MDM2-220ENST00000496959 A0A087WVE0 104 aa1.27□□□□□ -2.21
MDM2-220ENST00000496959 A0A1W2PPM0 123 aa1.27□□□□□ -2.21
MDM2-220ENST00000496959 H0Y9P7 68 aa1.27□□□□□ -2.21
MDM2-220ENST00000496959 K7EP34 96 aa1.27□□□□□ -2.21
MDM2-220ENST00000496959 SPTSSBQ8NFR3 76 aa1.27□□□□□ -2.21
MDM2-220ENST00000496959 CYSTM1Q9H1C7 97 aa1.27□□□□□ -2.21
MDM2-220ENST00000496959 SPCS1Q9Y6A9 102 aa1.27□□□□□ -2.21
MDM2-220ENST00000496959 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
MDM2-220ENST00000496959 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
MDM2-220ENST00000496959 MT4P47944 62 aa1.25□□□□□ -2.21
MDM2-220ENST00000496959 TRAV7A0A075B6U4 112 aa1.24□□□□□ -2.21
MDM2-220ENST00000496959 MT1GP13640 62 aa1.24□□□□□ -2.21
MDM2-220ENST00000496959 DMAC1Q96GE9 116 aa1.24□□□□□ -2.21
MDM2-220ENST00000496959 MT1EP04732 61 aa1.23□□□□□ -2.21
MDM2-220ENST00000496959 SMIM6P0DI80 62 aa1.23□□□□□ -2.21
MDM2-220ENST00000496959 LINC00208Q96KT6 92 aa1.23□□□□□ -2.21
MDM2-220ENST00000496959 HIST1H4AP62805 103 aaKnown RBP1.22□□□□□ -2.21
MDM2-220ENST00000496959 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
MDM2-220ENST00000496959 GTF2H5Q6ZYL4 71 aa1.21□□□□□ -2.22
MDM2-220ENST00000496959 F8W1H4 67 aa1.2□□□□□ -2.22
MDM2-220ENST00000496959 ACYP2P14621 99 aa1.2□□□□□ -2.22
MDM2-220ENST00000496959 CHKB-CPT1BH3BT56 60 aa1.19□□□□□ -2.22
MDM2-220ENST00000496959 COL5A1-AS1Q5SY13 56 aa1.19□□□□□ -2.22
MDM2-220ENST00000496959 MT1MQ8N339 61 aa1.19□□□□□ -2.22
MDM2-220ENST00000496959 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
MDM2-220ENST00000496959 A0A0D9SG42 100 aa1.17□□□□□ -2.22
MDM2-220ENST00000496959 ETDBQ3ZM63 59 aa1.17□□□□□ -2.22
MDM2-220ENST00000496959 LINC00643Q86TS7 51 aa1.17□□□□□ -2.22
MDM2-220ENST00000496959 SCGB1A1P11684 91 aa1.16□□□□□ -2.22
MDM2-220ENST00000496959 MT1LQ93083 61 aa1.16□□□□□ -2.22
MDM2-220ENST00000496959 C10orf95Q9H7T3 257 aa1.16□□□□□ -2.22
MDM2-220ENST00000496959 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
MDM2-220ENST00000496959 KRTAP19-5Q3LI72 72 aa1.15□□□□□ -2.23
MDM2-220ENST00000496959 KTN1-AS1Q86SY8 53 aa1.14□□□□□ -2.23
MDM2-220ENST00000496959 SMIM20Q8N5G0 67 aa1.13□□□□□ -2.23
MDM2-220ENST00000496959 SERP1Q9Y6X1 66 aa1.13□□□□□ -2.23
MDM2-220ENST00000496959 TNP1P09430 55 aa1.12□□□□□ -2.23
MDM2-220ENST00000496959 TMEM258P61165 79 aa1.12□□□□□ -2.23
MDM2-220ENST00000496959 J3QR89 54 aa1.1□□□□□ -2.23
MDM2-220ENST00000496959 Q1T7F1 81 aa1.1□□□□□ -2.23
MDM2-220ENST00000496959 COA5Q86WW8 74 aa1.09□□□□□ -2.23
MDM2-220ENST00000496959 SPATA8Q6RVD6 105 aa1.05□□□□□ -2.24
MDM2-220ENST00000496959 SERP2Q8N6R1 65 aa1.04□□□□□ -2.24
MDM2-220ENST00000496959 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
MDM2-220ENST00000496959 A0A1B0GU69 56 aa1.02□□□□□ -2.25
MDM2-220ENST00000496959 LOC105371267A0A1B0GV96 52 aa1.02□□□□□ -2.25
MDM2-220ENST00000496959 PRR15LQ9BU68 103 aa1.02□□□□□ -2.25
MDM2-220ENST00000496959 SNURFQ9Y675 71 aa1.02□□□□□ -2.25
MDM2-220ENST00000496959 MT1AP04731 61 aa1.01□□□□□ -2.25
MDM2-220ENST00000496959 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
MDM2-220ENST00000496959 H7BZZ5 65 aa0.98□□□□□ -2.25
MDM2-220ENST00000496959 MUC5BQ9HC84 5762 aaPredicted RBP0.97□□□□□ -2.25
MDM2-220ENST00000496959 A0A1B0GV90 55 aa0.96□□□□□ -2.26
MDM2-220ENST00000496959 K7ERU9 68 aa0.96□□□□□ -2.26
MDM2-220ENST00000496959 KRTAP6-1Q3LI64 71 aa0.96□□□□□ -2.26
MDM2-220ENST00000496959 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
MDM2-220ENST00000496959 ROMO1P60602 79 aa0.94□□□□□ -2.26
MDM2-220ENST00000496959 UQCR11O14957 56 aa0.93□□□□□ -2.26
MDM2-220ENST00000496959 COX7CP15954 63 aa0.91□□□□□ -2.26
MDM2-220ENST00000496959 ATP5EP56381 51 aaPredicted RBP0.91□□□□□ -2.26
MDM2-220ENST00000496959 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
MDM2-220ENST00000496959 RPS28P62857 69 aaKnown RBP0.89□□□□□ -2.27
MDM2-220ENST00000496959 LINC01558Q9Y6Z2 57 aa0.89□□□□□ -2.27
MDM2-220ENST00000496959 INE1O15225 51 aa0.87□□□□□ -2.27
MDM2-220ENST00000496959 MIR22HGQ0VDD5 57 aa0.87□□□□□ -2.27
MDM2-220ENST00000496959 CDC42SE1Q9NRR8 79 aa0.86□□□□□ -2.27
MDM2-220ENST00000496959 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
MDM2-220ENST00000496959 CCDC179H3BU77 68 aa0.74□□□□□ -2.29
MDM2-220ENST00000496959 BRK1Q8WUW1 75 aa0.72□□□□□ -2.29
MDM2-220ENST00000496959 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
MDM2-220ENST00000496959 PRM1P04553 51 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms