RNA–Protein interactions for RNA: ENST00000496424.2

LRMDA-208, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2 BASIC

Gene LRMDA, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-208ENST00000496424 KRTAP10-7P60409 375 aaPredicted RBP2.24□□□□□ -2.05
LRMDA-208ENST00000496424 MT3P25713 68 aa2.24□□□□□ -2.05
LRMDA-208ENST00000496424 KRTAP19-1Q8IUB9 90 aa2.24□□□□□ -2.05
LRMDA-208ENST00000496424 SPRR2GQ9BYE4 73 aa2.23□□□□□ -2.05
LRMDA-208ENST00000496424 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
LRMDA-208ENST00000496424 KRTAP19-4Q3LI73 84 aa2.22□□□□□ -2.05
LRMDA-208ENST00000496424 LCE1DQ5T752 114 aa2.22□□□□□ -2.05
LRMDA-208ENST00000496424 KRTAP9-3Q9BYQ3 159 aa2.2□□□□□ -2.06
LRMDA-208ENST00000496424 KRTAP19-5Q3LI72 72 aa2.2□□□□□ -2.06
LRMDA-208ENST00000496424 SYNE1Q8NF91 8797 aaKnown RBP2.17□□□□□ -2.06
LRMDA-208ENST00000496424 KRTAP9-6A8MVA2 160 aa2.16□□□□□ -2.06
LRMDA-208ENST00000496424 KMT2DO14686 5537 aa2.15□□□□□ -2.07
LRMDA-208ENST00000496424 SSPOA2VEC9 5147 aa2.15□□□□□ -2.07
LRMDA-208ENST00000496424 MT1BP07438 61 aa2.14□□□□□ -2.07
LRMDA-208ENST00000496424 LCE3BQ5TA77 95 aa2.14□□□□□ -2.07
LRMDA-208ENST00000496424 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
LRMDA-208ENST00000496424 CRCT1Q9UGL9 99 aa2.1□□□□□ -2.07
LRMDA-208ENST00000496424 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
LRMDA-208ENST00000496424 MT1XP80297 61 aa2.08□□□□□ -2.08
LRMDA-208ENST00000496424 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
LRMDA-208ENST00000496424 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
LRMDA-208ENST00000496424 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
LRMDA-208ENST00000496424 KRTAP4-8A0A0G2JLE6 195 aa2.06□□□□□ -2.08
LRMDA-208ENST00000496424 KRTAP4-7Q9BYR0 210 aa2.02□□□□□ -2.09
LRMDA-208ENST00000496424 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
LRMDA-208ENST00000496424 SYNE2Q8WXH0 6885 aaKnown RBP1.99□□□□□ -2.09
LRMDA-208ENST00000496424 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
LRMDA-208ENST00000496424 KRTAP19-6Q3LI70 58 aa1.97□□□□□ -2.09
LRMDA-208ENST00000496424 KRTAP4-9Q9BYQ8 210 aa1.96□□□□□ -2.1
LRMDA-208ENST00000496424 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
LRMDA-208ENST00000496424 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
LRMDA-208ENST00000496424 MT1GP13640 62 aa1.91□□□□□ -2.1
LRMDA-208ENST00000496424 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
LRMDA-208ENST00000496424 MT1LQ93083 61 aa1.91□□□□□ -2.1
LRMDA-208ENST00000496424 MT1AP04731 61 aa1.9□□□□□ -2.11
LRMDA-208ENST00000496424 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
LRMDA-208ENST00000496424 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
LRMDA-208ENST00000496424 KRTAP5-5Q701N2 237 aaPredicted RBP1.87□□□□□ -2.11
LRMDA-208ENST00000496424 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
LRMDA-208ENST00000496424 KRTAP19-7Q3SYF9 63 aa1.85□□□□□ -2.11
LRMDA-208ENST00000496424 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
LRMDA-208ENST00000496424 MT1EP04732 61 aa1.85□□□□□ -2.11
LRMDA-208ENST00000496424 KRTAP4-3Q9BYR4 195 aa1.82□□□□□ -2.12
LRMDA-208ENST00000496424 KRTAP5-9P26371 169 aa1.8□□□□□ -2.12
LRMDA-208ENST00000496424 SPRR2DP22532 72 aa1.76□□□□□ -2.13
LRMDA-208ENST00000496424 KRTAP5-3Q6L8H2 238 aa1.75□□□□□ -2.13
LRMDA-208ENST00000496424 SPRR2AP35326 72 aa1.74□□□□□ -2.13
LRMDA-208ENST00000496424 SPRR2EP22531 72 aa1.74□□□□□ -2.13
LRMDA-208ENST00000496424 SPRR2BP35325 72 aa1.74□□□□□ -2.13
LRMDA-208ENST00000496424 KRTAP19-3Q7Z4W3 81 aa1.74□□□□□ -2.13
LRMDA-208ENST00000496424 MT1MQ8N339 61 aa1.72□□□□□ -2.13
LRMDA-208ENST00000496424 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
LRMDA-208ENST00000496424 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
LRMDA-208ENST00000496424 NEBP20929 6669 aa1.64□□□□□ -2.15
LRMDA-208ENST00000496424 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
LRMDA-208ENST00000496424 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.16
LRMDA-208ENST00000496424 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
LRMDA-208ENST00000496424 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
LRMDA-208ENST00000496424 MT4P47944 62 aa1.53□□□□□ -2.16
LRMDA-208ENST00000496424 KRTAP5-4Q6L8H1 288 aa1.52□□□□□ -2.17
LRMDA-208ENST00000496424 KRTAP5-2Q701N4 177 aa1.39□□□□□ -2.19
LRMDA-208ENST00000496424 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
LRMDA-208ENST00000496424 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
LRMDA-208ENST00000496424 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
LRMDA-208ENST00000496424 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.2
LRMDA-208ENST00000496424 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
LRMDA-208ENST00000496424 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
LRMDA-208ENST00000496424 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
LRMDA-208ENST00000496424 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
LRMDA-208ENST00000496424 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
LRMDA-208ENST00000496424 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
LRMDA-208ENST00000496424 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
LRMDA-208ENST00000496424 KRTAP5-8O75690 187 aa1.18□□□□□ -2.22
LRMDA-208ENST00000496424 KRTAP4-4Q9BYR3 166 aa1.11□□□□□ -2.23
LRMDA-208ENST00000496424 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
LRMDA-208ENST00000496424 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
LRMDA-208ENST00000496424 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms