RNA–Protein interactions for RNA: ENST00000496390.5

GAB3-206, Transcript of GRB2 associated binding protein 3, humanhuman

TSL 1 (best)

Gene GAB3, Length 4,240 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAB3-206ENST00000496390 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
GAB3-206ENST00000496390 MT1BP07438 61 aa2.39□□□□□ -2.03
GAB3-206ENST00000496390 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
GAB3-206ENST00000496390 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
GAB3-206ENST00000496390 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
GAB3-206ENST00000496390 SPRR2EP22531 72 aa2.36□□□□□ -2.03
GAB3-206ENST00000496390 SPRR2BP35325 72 aa2.36□□□□□ -2.03
GAB3-206ENST00000496390 SPRR2AP35326 72 aa2.36□□□□□ -2.03
GAB3-206ENST00000496390 KMT2DO14686 5537 aa2.36□□□□□ -2.03
GAB3-206ENST00000496390 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
GAB3-206ENST00000496390 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
GAB3-206ENST00000496390 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.03
GAB3-206ENST00000496390 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
GAB3-206ENST00000496390 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
GAB3-206ENST00000496390 SYNE2Q8WXH0 6885 aaKnown RBP2.33□□□□□ -2.04
GAB3-206ENST00000496390 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
GAB3-206ENST00000496390 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
GAB3-206ENST00000496390 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
GAB3-206ENST00000496390 SPRR2DP22532 72 aa2.3□□□□□ -2.04
GAB3-206ENST00000496390 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
GAB3-206ENST00000496390 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
GAB3-206ENST00000496390 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
GAB3-206ENST00000496390 MT1XP80297 61 aa2.25□□□□□ -2.05
GAB3-206ENST00000496390 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
GAB3-206ENST00000496390 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
GAB3-206ENST00000496390 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
GAB3-206ENST00000496390 KRTAP4-8Q9BYQ9 185 aa2.22□□□□□ -2.05
GAB3-206ENST00000496390 LOC100996750A0A140TA64 210 aa2.2□□□□□ -2.06
GAB3-206ENST00000496390 KRTAP4-6Q9BYQ5 205 aa2.2□□□□□ -2.06
GAB3-206ENST00000496390 KRTAP10-7P60409 375 aaPredicted RBP2.18□□□□□ -2.06
GAB3-206ENST00000496390 LCE1DQ5T752 114 aa2.18□□□□□ -2.06
GAB3-206ENST00000496390 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
GAB3-206ENST00000496390 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
GAB3-206ENST00000496390 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
GAB3-206ENST00000496390 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.06
GAB3-206ENST00000496390 NEBP20929 6669 aa2.15□□□□□ -2.07
GAB3-206ENST00000496390 MT1GP13640 62 aa2.14□□□□□ -2.07
GAB3-206ENST00000496390 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
GAB3-206ENST00000496390 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
GAB3-206ENST00000496390 MT1EP04732 61 aa2.05□□□□□ -2.08
GAB3-206ENST00000496390 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
GAB3-206ENST00000496390 KRTAP9-6A8MVA2 160 aa2.04□□□□□ -2.08
GAB3-206ENST00000496390 KRTAP4-7Q9BYR0 210 aa1.98□□□□□ -2.09
GAB3-206ENST00000496390 MT1MQ8N339 61 aa1.97□□□□□ -2.09
GAB3-206ENST00000496390 MT1LQ93083 61 aa1.97□□□□□ -2.09
GAB3-206ENST00000496390 KRTAP19-7Q3SYF9 63 aa1.96□□□□□ -2.09
GAB3-206ENST00000496390 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
GAB3-206ENST00000496390 MT4P47944 62 aa1.92□□□□□ -2.1
GAB3-206ENST00000496390 PRM1P04553 51 aa1.9□□□□□ -2.11
GAB3-206ENST00000496390 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
GAB3-206ENST00000496390 KRTAP4-9Q9BYQ8 210 aa1.86□□□□□ -2.11
GAB3-206ENST00000496390 KRTAP5-4Q6L8H1 288 aa1.8□□□□□ -2.12
GAB3-206ENST00000496390 MT1AP04731 61 aa1.77□□□□□ -2.13
GAB3-206ENST00000496390 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
GAB3-206ENST00000496390 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
GAB3-206ENST00000496390 KRTAP5-3Q6L8H2 238 aa1.7□□□□□ -2.14
GAB3-206ENST00000496390 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
GAB3-206ENST00000496390 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
GAB3-206ENST00000496390 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
GAB3-206ENST00000496390 KRTAP4-2Q9BYR5 136 aa1.66□□□□□ -2.14
GAB3-206ENST00000496390 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
GAB3-206ENST00000496390 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
GAB3-206ENST00000496390 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
GAB3-206ENST00000496390 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
GAB3-206ENST00000496390 KRTAP5-2Q701N4 177 aa1.54□□□□□ -2.16
GAB3-206ENST00000496390 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
GAB3-206ENST00000496390 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
GAB3-206ENST00000496390 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
GAB3-206ENST00000496390 KRTAP5-8O75690 187 aa1.46□□□□□ -2.18
GAB3-206ENST00000496390 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
GAB3-206ENST00000496390 KRTAP5-1Q6L8H4 278 aa1.33□□□□□ -2.2
GAB3-206ENST00000496390 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
GAB3-206ENST00000496390 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
GAB3-206ENST00000496390 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
GAB3-206ENST00000496390 KRTAP4-4Q9BYR3 166 aa1.16□□□□□ -2.22
GAB3-206ENST00000496390 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
GAB3-206ENST00000496390 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
GAB3-206ENST00000496390 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 14.2 ms