RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 KRTAP19-7Q3SYF9 63 aa7.72□□□□□ -1.17
FGFR1-223ENST00000496296 MUC12Q9UKN1 5478 aa7.71□□□□□ -1.18
FGFR1-223ENST00000496296 KRTAP5-9P26371 169 aa7.68□□□□□ -1.18
FGFR1-223ENST00000496296 NEBP20929 6669 aa7.64□□□□□ -1.19
FGFR1-223ENST00000496296 LCE3CQ5T5A8 94 aa7.61□□□□□ -1.19
FGFR1-223ENST00000496296 MT1EP04732 61 aa7.6□□□□□ -1.19
FGFR1-223ENST00000496296 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
FGFR1-223ENST00000496296 MDN1Q9NU22 5596 aa7.55□□□□□ -1.2
FGFR1-223ENST00000496296 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
FGFR1-223ENST00000496296 MT1LQ93083 61 aa7.46□□□□□ -1.22
FGFR1-223ENST00000496296 SPRR2EP22531 72 aa7.33□□□□□ -1.24
FGFR1-223ENST00000496296 SPRR2BP35325 72 aa7.33□□□□□ -1.24
FGFR1-223ENST00000496296 SPRR2AP35326 72 aa7.33□□□□□ -1.24
FGFR1-223ENST00000496296 KRTAP19-3Q7Z4W3 81 aa7.32□□□□□ -1.24
FGFR1-223ENST00000496296 LCE1AQ5T7P2 110 aa7.29□□□□□ -1.24
FGFR1-223ENST00000496296 INE1O15225 51 aa7.27□□□□□ -1.25
FGFR1-223ENST00000496296 MT1GP13640 62 aa7.27□□□□□ -1.25
FGFR1-223ENST00000496296 KRTAP20-1Q3LI63 56 aa7.25□□□□□ -1.25
FGFR1-223ENST00000496296 KRTAP9-6A8MVA2 160 aa7.24□□□□□ -1.25
FGFR1-223ENST00000496296 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
FGFR1-223ENST00000496296 LCE5AQ5TCM9 118 aa7.17□□□□□ -1.26
FGFR1-223ENST00000496296 MT1MQ8N339 61 aa7.15□□□□□ -1.26
FGFR1-223ENST00000496296 KRTAP2-3P0C7H8 128 aa7.13□□□□□ -1.27
FGFR1-223ENST00000496296 KRTAP2-4Q9BYR9 128 aa7.13□□□□□ -1.27
FGFR1-223ENST00000496296 SPRR2DP22532 72 aa7.08□□□□□ -1.28
FGFR1-223ENST00000496296 KRTAP4-3Q9BYR4 195 aa7□□□□□ -1.29
FGFR1-223ENST00000496296 KRTAP2-1Q9BYU5 128 aa6.98□□□□□ -1.29
FGFR1-223ENST00000496296 KRTAP2-2Q9BYT5 123 aa6.92□□□□□ -1.3
FGFR1-223ENST00000496296 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
FGFR1-223ENST00000496296 DSTQ03001 7570 aaKnown RBP6.85□□□□□ -1.31
FGFR1-223ENST00000496296 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
FGFR1-223ENST00000496296 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
FGFR1-223ENST00000496296 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.39
FGFR1-223ENST00000496296 MT1AP04731 61 aa6.35□□□□□ -1.39
FGFR1-223ENST00000496296 KRTAP6-1Q3LI64 71 aa6.27□□□□□ -1.41
FGFR1-223ENST00000496296 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
FGFR1-223ENST00000496296 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
FGFR1-223ENST00000496296 MT4P47944 62 aa6.21□□□□□ -1.42
FGFR1-223ENST00000496296 KRTAP5-4Q6L8H1 288 aa6.21□□□□□ -1.42
FGFR1-223ENST00000496296 HMCN1Q96RW7 5635 aa6.15□□□□□ -1.43
FGFR1-223ENST00000496296 KRTAP4-6Q9BYQ5 205 aa6.08□□□□□ -1.44
FGFR1-223ENST00000496296 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
FGFR1-223ENST00000496296 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
FGFR1-223ENST00000496296 GPR98Q8WXG9 6306 aa5.99□□□□□ -1.45
FGFR1-223ENST00000496296 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
FGFR1-223ENST00000496296 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
FGFR1-223ENST00000496296 AHNAK2Q8IVF2 5795 aa5.79□□□□□ -1.48
FGFR1-223ENST00000496296 MT3P25713 68 aa5.78□□□□□ -1.48
FGFR1-223ENST00000496296 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
FGFR1-223ENST00000496296 LCE3DQ9BYE3 92 aa5.78□□□□□ -1.48
FGFR1-223ENST00000496296 LCE3EQ5T5B0 92 aa5.7□□□□□ -1.5
FGFR1-223ENST00000496296 KRTAP5-10Q6L8G5 202 aa5.68□□□□□ -1.5
FGFR1-223ENST00000496296 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
FGFR1-223ENST00000496296 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
FGFR1-223ENST00000496296 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
FGFR1-223ENST00000496296 PRM1P04553 51 aa5.3□□□□□ -1.56
FGFR1-223ENST00000496296 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
FGFR1-223ENST00000496296 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
FGFR1-223ENST00000496296 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
FGFR1-223ENST00000496296 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
FGFR1-223ENST00000496296 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
FGFR1-223ENST00000496296 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
FGFR1-223ENST00000496296 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
FGFR1-223ENST00000496296 MUC5BQ9HC84 5762 aaPredicted RBP4.77□□□□□ -1.65
FGFR1-223ENST00000496296 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
FGFR1-223ENST00000496296 AHNAKQ09666 5890 aaKnown RBP4.67□□□□□ -1.66
FGFR1-223ENST00000496296 LCE1CQ5T751 118 aa4.65□□□□□ -1.66
FGFR1-223ENST00000496296 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
FGFR1-223ENST00000496296 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
FGFR1-223ENST00000496296 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
FGFR1-223ENST00000496296 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.76
FGFR1-223ENST00000496296 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
FGFR1-223ENST00000496296 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
FGFR1-223ENST00000496296 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
FGFR1-223ENST00000496296 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
FGFR1-223ENST00000496296 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
FGFR1-223ENST00000496296 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
FGFR1-223ENST00000496296 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 177.9 ms