RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 USH2AO75445 5202 aa3.07□□□□□ -1.92
USP39-219ENST00000496047 KRTAP10-10P60014 251 aa3.06□□□□□ -1.92
USP39-219ENST00000496047 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
USP39-219ENST00000496047 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
USP39-219ENST00000496047 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
USP39-219ENST00000496047 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
USP39-219ENST00000496047 TNP1P09430 55 aa3.02□□□□□ -1.93
USP39-219ENST00000496047 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
USP39-219ENST00000496047 MT2AP02795 61 aa3.01□□□□□ -1.93
USP39-219ENST00000496047 MT1FP04733 61 aa2.98□□□□□ -1.93
USP39-219ENST00000496047 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
USP39-219ENST00000496047 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
USP39-219ENST00000496047 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
USP39-219ENST00000496047 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
USP39-219ENST00000496047 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
USP39-219ENST00000496047 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
USP39-219ENST00000496047 KRTAP2-3P0C7H8 128 aa2.86□□□□□ -1.95
USP39-219ENST00000496047 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
USP39-219ENST00000496047 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
USP39-219ENST00000496047 MT1BP07438 61 aa2.85□□□□□ -1.95
USP39-219ENST00000496047 KRTAP10-5P60370 271 aa2.84□□□□□ -1.95
USP39-219ENST00000496047 KMT2DO14686 5537 aa2.82□□□□□ -1.96
USP39-219ENST00000496047 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
USP39-219ENST00000496047 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
USP39-219ENST00000496047 MT1XP80297 61 aa2.79□□□□□ -1.96
USP39-219ENST00000496047 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
USP39-219ENST00000496047 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
USP39-219ENST00000496047 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
USP39-219ENST00000496047 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
USP39-219ENST00000496047 KRTAP2-1Q9BYU5 128 aa2.73□□□□□ -1.97
USP39-219ENST00000496047 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
USP39-219ENST00000496047 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
USP39-219ENST00000496047 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
USP39-219ENST00000496047 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
USP39-219ENST00000496047 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
USP39-219ENST00000496047 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
USP39-219ENST00000496047 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
USP39-219ENST00000496047 KRTAP19-5Q3LI72 72 aa2.58□□□□□ -2
USP39-219ENST00000496047 SPRR2EP22531 72 aa2.48□□□□□ -2.01
USP39-219ENST00000496047 SPRR2BP35325 72 aa2.48□□□□□ -2.01
USP39-219ENST00000496047 SPRR2AP35326 72 aa2.48□□□□□ -2.01
USP39-219ENST00000496047 KRTAP19-7Q3SYF9 63 aa2.47□□□□□ -2.01
USP39-219ENST00000496047 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
USP39-219ENST00000496047 MT1EP04732 61 aa2.46□□□□□ -2.02
USP39-219ENST00000496047 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
USP39-219ENST00000496047 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
USP39-219ENST00000496047 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
USP39-219ENST00000496047 MT1LQ93083 61 aa2.43□□□□□ -2.02
USP39-219ENST00000496047 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
USP39-219ENST00000496047 SPRR2DP22532 72 aa2.41□□□□□ -2.02
USP39-219ENST00000496047 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
USP39-219ENST00000496047 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
USP39-219ENST00000496047 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
USP39-219ENST00000496047 MT1GP13640 62 aa2.37□□□□□ -2.03
USP39-219ENST00000496047 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
USP39-219ENST00000496047 MT1MQ8N339 61 aa2.32□□□□□ -2.04
USP39-219ENST00000496047 INE1O15225 51 aa2.3□□□□□ -2.04
USP39-219ENST00000496047 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
USP39-219ENST00000496047 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
USP39-219ENST00000496047 MT4P47944 62 aa2.14□□□□□ -2.07
USP39-219ENST00000496047 KRTAP5-5Q701N2 237 aaPredicted RBP2.13□□□□□ -2.07
USP39-219ENST00000496047 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
USP39-219ENST00000496047 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
USP39-219ENST00000496047 MT1AP04731 61 aa2.1□□□□□ -2.07
USP39-219ENST00000496047 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
USP39-219ENST00000496047 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
USP39-219ENST00000496047 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
USP39-219ENST00000496047 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
USP39-219ENST00000496047 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
USP39-219ENST00000496047 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
USP39-219ENST00000496047 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
USP39-219ENST00000496047 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
USP39-219ENST00000496047 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
USP39-219ENST00000496047 PRM1P04553 51 aa1.69□□□□□ -2.14
USP39-219ENST00000496047 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
USP39-219ENST00000496047 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
USP39-219ENST00000496047 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
USP39-219ENST00000496047 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 86.3 ms