RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 HMCN2Q8NDA2 5059 aa1.54□□□□□ -2.16
NF1-216ENST00000495910 KRTAP4-8A0A0G2JLE6 195 aa1.54□□□□□ -2.16
NF1-216ENST00000495910 MT4P47944 62 aa1.54□□□□□ -2.16
NF1-216ENST00000495910 KRTAP4-8Q9BYQ9 185 aa1.54□□□□□ -2.16
NF1-216ENST00000495910 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.53□□□□□ -2.17
NF1-216ENST00000495910 MT1BP07438 61 aa1.52□□□□□ -2.17
NF1-216ENST00000495910 MT1EP04732 61 aa1.51□□□□□ -2.17
NF1-216ENST00000495910 KRTAP9-3Q9BYQ3 159 aa1.51□□□□□ -2.17
NF1-216ENST00000495910 KRTAP9-8Q9BYQ0 159 aa1.5□□□□□ -2.17
NF1-216ENST00000495910 KRTAP4-7Q9BYR0 210 aa1.5□□□□□ -2.17
NF1-216ENST00000495910 KRTAP9-2Q9BYQ4 174 aa1.49□□□□□ -2.17
NF1-216ENST00000495910 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
NF1-216ENST00000495910 LCE1EQ5T753 118 aa1.48□□□□□ -2.17
NF1-216ENST00000495910 LCE1FQ5T754 118 aa1.48□□□□□ -2.17
NF1-216ENST00000495910 LCE1AQ5T7P2 110 aa1.48□□□□□ -2.17
NF1-216ENST00000495910 RNF213Q63HN8 5207 aa1.48□□□□□ -2.17
NF1-216ENST00000495910 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
NF1-216ENST00000495910 MT1MQ8N339 61 aa1.47□□□□□ -2.17
NF1-216ENST00000495910 KRTAP9-9Q9BYP9 154 aa1.46□□□□□ -2.18
NF1-216ENST00000495910 KRTAP9-4Q9BYQ2 154 aa1.46□□□□□ -2.18
NF1-216ENST00000495910 MT1AP04731 61 aa1.44□□□□□ -2.18
NF1-216ENST00000495910 KRTAP19-2Q3LHN2 52 aa1.44□□□□□ -2.18
NF1-216ENST00000495910 LPAP08519 4548 aa1.43□□□□□ -2.18
NF1-216ENST00000495910 KRTAP6-2Q3LI66 62 aa1.43□□□□□ -2.18
NF1-216ENST00000495910 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
NF1-216ENST00000495910 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
NF1-216ENST00000495910 KRTAP2-1Q9BYU5 128 aa1.41□□□□□ -2.18
NF1-216ENST00000495910 KRTAP4-9Q9BYQ8 210 aa1.4□□□□□ -2.19
NF1-216ENST00000495910 KRTAP9-6A0A140TA67 174 aa1.39□□□□□ -2.19
NF1-216ENST00000495910 FAT4Q6V0I7 4981 aa1.38□□□□□ -2.19
NF1-216ENST00000495910 KRTAP4-2Q9BYR5 136 aa1.38□□□□□ -2.19
NF1-216ENST00000495910 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
NF1-216ENST00000495910 KRTAP2-2Q9BYT5 123 aa1.37□□□□□ -2.19
NF1-216ENST00000495910 KRTAP4-3Q9BYR4 195 aa1.36□□□□□ -2.19
NF1-216ENST00000495910 KRTAP9-7A8MTY7 169 aa1.35□□□□□ -2.19
NF1-216ENST00000495910 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.19
NF1-216ENST00000495910 KRTAP5-2Q701N4 177 aa1.32□□□□□ -2.2
NF1-216ENST00000495910 USH2AO75445 5202 aa1.31□□□□□ -2.2
NF1-216ENST00000495910 KRTAP20-1Q3LI63 56 aa1.28□□□□□ -2.2
NF1-216ENST00000495910 KRTAP19-7Q3SYF9 63 aa1.27□□□□□ -2.21
NF1-216ENST00000495910 SSPOA2VEC9 5147 aa1.27□□□□□ -2.21
NF1-216ENST00000495910 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
NF1-216ENST00000495910 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
NF1-216ENST00000495910 MUC2Q02817 5179 aa1.25□□□□□ -2.21
NF1-216ENST00000495910 KMT2DO14686 5537 aa1.24□□□□□ -2.21
NF1-216ENST00000495910 KRTAP4-11Q9BYQ6 195 aa1.24□□□□□ -2.21
NF1-216ENST00000495910 KRTAP9-6A8MVA2 160 aa1.22□□□□□ -2.21
NF1-216ENST00000495910 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
NF1-216ENST00000495910 SYNE1Q8NF91 8797 aaKnown RBP1.18□□□□□ -2.22
NF1-216ENST00000495910 FSIP2Q5CZC0 6907 aa1.16□□□□□ -2.22
NF1-216ENST00000495910 KRTAP5-9P26371 169 aa1.16□□□□□ -2.22
NF1-216ENST00000495910 SYNE2Q8WXH0 6885 aaKnown RBP1.14□□□□□ -2.23
NF1-216ENST00000495910 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.12□□□□□ -2.23
NF1-216ENST00000495910 OBSCNQ5VST9 7968 aa1.11□□□□□ -2.23
NF1-216ENST00000495910 KRTAP5-3Q6L8H2 238 aa1.1□□□□□ -2.23
NF1-216ENST00000495910 NEBP20929 6669 aa1.08□□□□□ -2.24
NF1-216ENST00000495910 FCGBPQ9Y6R7 5405 aaPredicted RBP1.08□□□□□ -2.24
NF1-216ENST00000495910 KRTAP4-4Q9BYR3 166 aa1.06□□□□□ -2.24
NF1-216ENST00000495910 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
NF1-216ENST00000495910 KRTAP5-4Q6L8H1 288 aa1.05□□□□□ -2.24
NF1-216ENST00000495910 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
NF1-216ENST00000495910 MUC12Q9UKN1 5478 aa1.04□□□□□ -2.24
NF1-216ENST00000495910 MACF1Q9UPN3 7388 aaKnown RBP0.99□□□□□ -2.25
NF1-216ENST00000495910 KRTAP5-5Q701N2 237 aaPredicted RBP0.99□□□□□ -2.25
NF1-216ENST00000495910 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
NF1-216ENST00000495910 MUC19Q7Z5P9 8384 aa0.93□□□□□ -2.26
NF1-216ENST00000495910 KRTAP5-11Q6L8G4 156 aa0.93□□□□□ -2.26
NF1-216ENST00000495910 GPR98Q8WXG9 6306 aa0.9□□□□□ -2.27
NF1-216ENST00000495910 DSTQ03001 7570 aaKnown RBP0.87□□□□□ -2.27
NF1-216ENST00000495910 KRTAP5-1Q6L8H4 278 aa0.83□□□□□ -2.28
NF1-216ENST00000495910 KRTAP5-8O75690 187 aa0.82□□□□□ -2.28
NF1-216ENST00000495910 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
NF1-216ENST00000495910 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
NF1-216ENST00000495910 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
NF1-216ENST00000495910 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
NF1-216ENST00000495910 KRTAP5-7Q6L8G8 165 aa0.72□□□□□ -2.29
NF1-216ENST00000495910 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
NF1-216ENST00000495910 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 181.4 ms