RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 LRP1Q07954 4544 aaKnown RBP1.27□□□□□ -2.21
PHC3-215ENST00000495893 KRTAP19-2Q3LHN2 52 aa1.27□□□□□ -2.21
PHC3-215ENST00000495893 PRM1P04553 51 aa1.26□□□□□ -2.21
PHC3-215ENST00000495893 MUC17Q685J3 4493 aa1.25□□□□□ -2.21
PHC3-215ENST00000495893 MT1BP07438 61 aa1.25□□□□□ -2.21
PHC3-215ENST00000495893 KRTAP2-2Q9BYT5 123 aa1.25□□□□□ -2.21
PHC3-215ENST00000495893 KRTAP2-1Q9BYU5 128 aa1.25□□□□□ -2.21
PHC3-215ENST00000495893 LCE4AQ5TA78 99 aa1.22□□□□□ -2.21
PHC3-215ENST00000495893 MACF1Q9UPN3 7388 aaKnown RBP1.22□□□□□ -2.21
PHC3-215ENST00000495893 MT1XP80297 61 aa1.22□□□□□ -2.21
PHC3-215ENST00000495893 KRTAP19-3Q7Z4W3 81 aa1.22□□□□□ -2.21
PHC3-215ENST00000495893 PKD1P98161 4303 aa1.22□□□□□ -2.21
PHC3-215ENST00000495893 MT1LQ93083 61 aa1.21□□□□□ -2.22
PHC3-215ENST00000495893 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
PHC3-215ENST00000495893 TNXBP22105 4242 aa1.2□□□□□ -2.22
PHC3-215ENST00000495893 KRTAP5-9P26371 169 aa1.17□□□□□ -2.22
PHC3-215ENST00000495893 MT1EP04732 61 aa1.16□□□□□ -2.22
PHC3-215ENST00000495893 SYNE2Q8WXH0 6885 aaKnown RBP1.15□□□□□ -2.23
PHC3-215ENST00000495893 LRP2P98164 4655 aa1.15□□□□□ -2.23
PHC3-215ENST00000495893 USH2AO75445 5202 aa1.15□□□□□ -2.23
PHC3-215ENST00000495893 DSTQ03001 7570 aaKnown RBP1.12□□□□□ -2.23
PHC3-215ENST00000495893 MT1AP04731 61 aa1.12□□□□□ -2.23
PHC3-215ENST00000495893 MT1MQ8N339 61 aa1.12□□□□□ -2.23
PHC3-215ENST00000495893 LCE1BQ5T7P3 118 aa1.12□□□□□ -2.23
PHC3-215ENST00000495893 NEBP20929 6669 aa1.12□□□□□ -2.23
PHC3-215ENST00000495893 KRTAP4-8A0A0G2JLE6 195 aa1.11□□□□□ -2.23
PHC3-215ENST00000495893 KRTAP4-8Q9BYQ9 185 aa1.11□□□□□ -2.23
PHC3-215ENST00000495893 MT4P47944 62 aa1.1□□□□□ -2.23
PHC3-215ENST00000495893 MUC2Q02817 5179 aa1.1□□□□□ -2.23
PHC3-215ENST00000495893 LCE1DQ5T752 114 aa1.1□□□□□ -2.23
PHC3-215ENST00000495893 FSIP2Q5CZC0 6907 aa1.09□□□□□ -2.24
PHC3-215ENST00000495893 SYNE1Q8NF91 8797 aaKnown RBP1.08□□□□□ -2.24
PHC3-215ENST00000495893 KRTAP4-7Q9BYR0 210 aa1.08□□□□□ -2.24
PHC3-215ENST00000495893 LCE5AQ5TCM9 118 aa1.07□□□□□ -2.24
PHC3-215ENST00000495893 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
PHC3-215ENST00000495893 LOC100996750A0A140TA64 210 aa1.05□□□□□ -2.24
PHC3-215ENST00000495893 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
PHC3-215ENST00000495893 GPR98Q8WXG9 6306 aa1.03□□□□□ -2.24
PHC3-215ENST00000495893 KRTAP9-9Q9BYP9 154 aa1.03□□□□□ -2.24
PHC3-215ENST00000495893 KRTAP19-7Q3SYF9 63 aa1.02□□□□□ -2.25
PHC3-215ENST00000495893 KRTAP4-3Q9BYR4 195 aa1.02□□□□□ -2.25
PHC3-215ENST00000495893 KRTAP4-9Q9BYQ8 210 aa1.01□□□□□ -2.25
PHC3-215ENST00000495893 LCE1CQ5T751 118 aa1□□□□□ -2.25
PHC3-215ENST00000495893 LCE1EQ5T753 118 aa1□□□□□ -2.25
PHC3-215ENST00000495893 LCE1FQ5T754 118 aa1□□□□□ -2.25
PHC3-215ENST00000495893 KRTAP9-6A8MVA2 160 aa1□□□□□ -2.25
PHC3-215ENST00000495893 KMT2DO14686 5537 aa1□□□□□ -2.25
PHC3-215ENST00000495893 FCGBPQ9Y6R7 5405 aaPredicted RBP0.99□□□□□ -2.25
PHC3-215ENST00000495893 KRTAP5-4Q6L8H1 288 aa0.99□□□□□ -2.25
PHC3-215ENST00000495893 HMCN1Q96RW7 5635 aa0.98□□□□□ -2.25
PHC3-215ENST00000495893 KRTAP9-4Q9BYQ2 154 aa0.96□□□□□ -2.26
PHC3-215ENST00000495893 MUC12Q9UKN1 5478 aa0.95□□□□□ -2.26
PHC3-215ENST00000495893 KRTAP20-2Q3LI61 65 aa0.93□□□□□ -2.26
PHC3-215ENST00000495893 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
PHC3-215ENST00000495893 MDN1Q9NU22 5596 aa0.93□□□□□ -2.26
PHC3-215ENST00000495893 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
PHC3-215ENST00000495893 MUC19Q7Z5P9 8384 aa0.91□□□□□ -2.26
PHC3-215ENST00000495893 KRTAP4-6Q9BYQ5 205 aa0.88□□□□□ -2.27
PHC3-215ENST00000495893 KRTAP5-3Q6L8H2 238 aa0.88□□□□□ -2.27
PHC3-215ENST00000495893 KRTAP4-11Q9BYQ6 195 aa0.88□□□□□ -2.27
PHC3-215ENST00000495893 MUC5BQ9HC84 5762 aaPredicted RBP0.86□□□□□ -2.27
PHC3-215ENST00000495893 KRTAP5-7Q6L8G8 165 aa0.85□□□□□ -2.27
PHC3-215ENST00000495893 KRTAP5-5Q701N2 237 aaPredicted RBP0.81□□□□□ -2.28
PHC3-215ENST00000495893 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
PHC3-215ENST00000495893 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
PHC3-215ENST00000495893 KRTAP4-12Q9BQ66 201 aa0.79□□□□□ -2.28
PHC3-215ENST00000495893 KRTAP5-8O75690 187 aa0.76□□□□□ -2.29
PHC3-215ENST00000495893 KRTAP5-2Q701N4 177 aa0.76□□□□□ -2.29
PHC3-215ENST00000495893 KRTAP4-4Q9BYR3 166 aa0.75□□□□□ -2.29
PHC3-215ENST00000495893 KRTAP4-2Q9BYR5 136 aa0.74□□□□□ -2.29
PHC3-215ENST00000495893 KRTAP5-1Q6L8H4 278 aa0.67□□□□□ -2.3
PHC3-215ENST00000495893 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
PHC3-215ENST00000495893 KRTAP5-11Q6L8G4 156 aa0.66□□□□□ -2.3
PHC3-215ENST00000495893 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.61□□□□□ -2.31
PHC3-215ENST00000495893 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
PHC3-215ENST00000495893 KRTAP21-2Q3LI59 83 aa0.58□□□□□ -2.32
PHC3-215ENST00000495893 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms