RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
CHTOP-206ENST00000495554 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
CHTOP-206ENST00000495554 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
CHTOP-206ENST00000495554 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
CHTOP-206ENST00000495554 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
CHTOP-206ENST00000495554 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
CHTOP-206ENST00000495554 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
CHTOP-206ENST00000495554 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
CHTOP-206ENST00000495554 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
CHTOP-206ENST00000495554 MACF1Q9UPN3 7388 aaKnown RBP4.9□□□□□ -1.62
CHTOP-206ENST00000495554 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
CHTOP-206ENST00000495554 MT1GP13640 62 aa4.89□□□□□ -1.63
CHTOP-206ENST00000495554 MT1MQ8N339 61 aa4.87□□□□□ -1.63
CHTOP-206ENST00000495554 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
CHTOP-206ENST00000495554 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
CHTOP-206ENST00000495554 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
CHTOP-206ENST00000495554 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
CHTOP-206ENST00000495554 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
CHTOP-206ENST00000495554 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
CHTOP-206ENST00000495554 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
CHTOP-206ENST00000495554 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
CHTOP-206ENST00000495554 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
CHTOP-206ENST00000495554 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
CHTOP-206ENST00000495554 SPRR2EP22531 72 aa4.5□□□□□ -1.69
CHTOP-206ENST00000495554 SPRR2BP35325 72 aa4.5□□□□□ -1.69
CHTOP-206ENST00000495554 SPRR2AP35326 72 aa4.5□□□□□ -1.69
CHTOP-206ENST00000495554 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
CHTOP-206ENST00000495554 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
CHTOP-206ENST00000495554 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
CHTOP-206ENST00000495554 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
CHTOP-206ENST00000495554 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
CHTOP-206ENST00000495554 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
CHTOP-206ENST00000495554 MT1AP04731 61 aa4.36□□□□□ -1.71
CHTOP-206ENST00000495554 SPRR2DP22532 72 aa4.32□□□□□ -1.72
CHTOP-206ENST00000495554 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
CHTOP-206ENST00000495554 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
CHTOP-206ENST00000495554 NEBP20929 6669 aa4.26□□□□□ -1.73
CHTOP-206ENST00000495554 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
CHTOP-206ENST00000495554 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
CHTOP-206ENST00000495554 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
CHTOP-206ENST00000495554 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
CHTOP-206ENST00000495554 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
CHTOP-206ENST00000495554 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
CHTOP-206ENST00000495554 PRM1P04553 51 aa4□□□□□ -1.77
CHTOP-206ENST00000495554 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
CHTOP-206ENST00000495554 MT3P25713 68 aa3.94□□□□□ -1.78
CHTOP-206ENST00000495554 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
CHTOP-206ENST00000495554 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
CHTOP-206ENST00000495554 MT4P47944 62 aa3.79□□□□□ -1.8
CHTOP-206ENST00000495554 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
CHTOP-206ENST00000495554 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.81
CHTOP-206ENST00000495554 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
CHTOP-206ENST00000495554 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
CHTOP-206ENST00000495554 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
CHTOP-206ENST00000495554 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
CHTOP-206ENST00000495554 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
CHTOP-206ENST00000495554 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
CHTOP-206ENST00000495554 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
CHTOP-206ENST00000495554 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
CHTOP-206ENST00000495554 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CHTOP-206ENST00000495554 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
CHTOP-206ENST00000495554 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
CHTOP-206ENST00000495554 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
CHTOP-206ENST00000495554 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
CHTOP-206ENST00000495554 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
CHTOP-206ENST00000495554 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
CHTOP-206ENST00000495554 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
CHTOP-206ENST00000495554 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
CHTOP-206ENST00000495554 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
CHTOP-206ENST00000495554 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
CHTOP-206ENST00000495554 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
CHTOP-206ENST00000495554 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
CHTOP-206ENST00000495554 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
CHTOP-206ENST00000495554 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
CHTOP-206ENST00000495554 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
CHTOP-206ENST00000495554 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
CHTOP-206ENST00000495554 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CHTOP-206ENST00000495554 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms