RNA–Protein interactions for RNA: ENST00000495300.1

PBX2-204, Transcript of PBX homeobox 2, human

TSL 3

Gene PBX2, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBX2-204	ENST00000495300	SPRR2E	P22531	72 aa		5.25	□□□□□ -1.57
PBX2-204	ENST00000495300	SPRR2B	P35325	72 aa		5.25	□□□□□ -1.57
PBX2-204	ENST00000495300	SPRR2A	P35326	72 aa		5.25	□□□□□ -1.57
PBX2-204	ENST00000495300	C10orf95	Q9H7T3	257 aa		5.2	□□□□□ -1.58
PBX2-204	ENST00000495300	PSPHP1	O15172	72 aa		5.19	□□□□□ -1.58
PBX2-204	ENST00000495300	MIR22HG	Q0VDD5	57 aa		5.18	□□□□□ -1.58
PBX2-204	ENST00000495300	KRTAP19-7	Q3SYF9	63 aa		5.17	□□□□□ -1.58
PBX2-204	ENST00000495300	KRTAP20-1	Q3LI63	56 aa		5.16	□□□□□ -1.58
PBX2-204	ENST00000495300	KTN1-AS1	Q86SY8	53 aa		5.15	□□□□□ -1.59
PBX2-204	ENST00000495300	MT1E	P04732	61 aa		5.1	□□□□□ -1.59
PBX2-204	ENST00000495300	TNP1	P09430	55 aa		5.1	□□□□□ -1.59
PBX2-204	ENST00000495300	KRTAP2-3	P0C7H8	128 aa		5.1	□□□□□ -1.59
PBX2-204	ENST00000495300	KRTAP2-4	Q9BYR9	128 aa		5.1	□□□□□ -1.59
PBX2-204	ENST00000495300	SPRR2D	P22532	72 aa		5.08	□□□□□ -1.6
PBX2-204	ENST00000495300	KRTAP19-5	Q3LI72	72 aa		5.06	□□□□□ -1.6
PBX2-204	ENST00000495300	LCE3A	Q5TA76	89 aa		5.03	□□□□□ -1.6
PBX2-204	ENST00000495300		A6NED7	52 aa		5.01	□□□□□ -1.61
PBX2-204	ENST00000495300	KRTAP19-3	Q7Z4W3	81 aa		5	□□□□□ -1.61
PBX2-204	ENST00000495300		K7ERS5	55 aa		4.99	□□□□□ -1.61
PBX2-204	ENST00000495300	KRTAP2-2	Q9BYT5	123 aa		4.95	□□□□□ -1.62
PBX2-204	ENST00000495300	KRTAP2-1	Q9BYU5	128 aa		4.95	□□□□□ -1.62
PBX2-204	ENST00000495300	CDC42SE1	Q9NRR8	79 aa		4.94	□□□□□ -1.62
PBX2-204	ENST00000495300	KRTAP25-1	Q3LHN0	102 aa		4.93	□□□□□ -1.62
PBX2-204	ENST00000495300	MT1G	P13640	62 aa		4.91	□□□□□ -1.62
PBX2-204	ENST00000495300	MT1L	Q93083	61 aa		4.91	□□□□□ -1.62
PBX2-204	ENST00000495300	KRTAP12-3	P60328	96 aa		4.84	□□□□□ -1.63
PBX2-204	ENST00000495300	PP632	Q6XCG6	107 aa		4.83	□□□□□ -1.64
PBX2-204	ENST00000495300	MT1M	Q8N339	61 aa		4.83	□□□□□ -1.64
PBX2-204	ENST00000495300	DST	Q03001	7570 aa	Known RBP	4.82	□□□□□ -1.64
PBX2-204	ENST00000495300	KRTAP23-1	A1A580	65 aa		4.79	□□□□□ -1.64
PBX2-204	ENST00000495300	ROMO1	P60602	79 aa		4.74	□□□□□ -1.65
PBX2-204	ENST00000495300	KRTAP4-3	Q9BYR4	195 aa		4.71	□□□□□ -1.66
PBX2-204	ENST00000495300	KRTAP15-1	Q3LI76	137 aa		4.59	□□□□□ -1.67
PBX2-204	ENST00000495300	PRAC1	Q96KF2	57 aa		4.53	□□□□□ -1.68
PBX2-204	ENST00000495300	KRTAP5-4	Q6L8H1	288 aa		4.52	□□□□□ -1.69
PBX2-204	ENST00000495300	LCE3C	Q5T5A8	94 aa		4.49	□□□□□ -1.69
PBX2-204	ENST00000495300	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.45	□□□□□ -1.7
PBX2-204	ENST00000495300	MT4	P47944	62 aa		4.41	□□□□□ -1.7
PBX2-204	ENST00000495300	HMCN1	Q96RW7	5635 aa		4.34	□□□□□ -1.71
PBX2-204	ENST00000495300	KRTAP9-6	A8MVA2	160 aa		4.27	□□□□□ -1.73
PBX2-204	ENST00000495300		A0A0A0MQY5	61 aa		4.25	□□□□□ -1.73
PBX2-204	ENST00000495300	SPRR5	A0A1B0GTR4	108 aa		4.23	□□□□□ -1.73
PBX2-204	ENST00000495300	KRTAP20-2	Q3LI61	65 aa		4.22	□□□□□ -1.73
PBX2-204	ENST00000495300	KRTAP12-4	P60329	112 aa		4.21	□□□□□ -1.74
PBX2-204	ENST00000495300	SYNE1	Q8NF91	8797 aa	Known RBP	4.19	□□□□□ -1.74
PBX2-204	ENST00000495300	MT1A	P04731	61 aa		4.16	□□□□□ -1.74
PBX2-204	ENST00000495300	KRTAP6-1	Q3LI64	71 aa		4.14	□□□□□ -1.75
PBX2-204	ENST00000495300	GPR98	Q8WXG9	6306 aa		4.13	□□□□□ -1.75
PBX2-204	ENST00000495300	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.09	□□□□□ -1.75
PBX2-204	ENST00000495300	NDUFAF8	A1L188	74 aa		4.07	□□□□□ -1.76
PBX2-204	ENST00000495300	KRTAP5-10	Q6L8G5	202 aa		4.07	□□□□□ -1.76
PBX2-204	ENST00000495300	AHNAK2	Q8IVF2	5795 aa		4.06	□□□□□ -1.76
PBX2-204	ENST00000495300	LUZP6	Q538Z0	58 aa		4.06	□□□□□ -1.76
PBX2-204	ENST00000495300	KRTAP5-2	Q701N4	177 aa		4	□□□□□ -1.77
PBX2-204	ENST00000495300	KRTAP5-11	Q6L8G4	156 aa		3.96	□□□□□ -1.78
PBX2-204	ENST00000495300	KRTAP6-2	Q3LI66	62 aa		3.91	□□□□□ -1.78
PBX2-204	ENST00000495300	KRTAP5-7	Q6L8G8	165 aa		3.88	□□□□□ -1.79
PBX2-204	ENST00000495300	MT3	P25713	68 aa		3.79	□□□□□ -1.8
PBX2-204	ENST00000495300	LCE1E	Q5T753	118 aa		3.76	□□□□□ -1.81
PBX2-204	ENST00000495300	KRTAP5-8	O75690	187 aa		3.69	□□□□□ -1.82
PBX2-204	ENST00000495300	OBSCN	Q5VST9	7968 aa		3.67	□□□□□ -1.82
PBX2-204	ENST00000495300	INE1	O15225	51 aa		3.57	□□□□□ -1.84
PBX2-204	ENST00000495300	KRTAP5-1	Q6L8H4	278 aa		3.55	□□□□□ -1.84
PBX2-204	ENST00000495300	KRTAP4-4	Q9BYR3	166 aa		3.39	□□□□□ -1.87
PBX2-204	ENST00000495300	MUC5AC	P98088	5654 aa		3.36	□□□□□ -1.87
PBX2-204	ENST00000495300	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.31	□□□□□ -1.88
PBX2-204	ENST00000495300	LCE3D	Q9BYE3	92 aa		3.26	□□□□□ -1.89
PBX2-204	ENST00000495300	AHNAK	Q09666	5890 aa	Known RBP	3.23	□□□□□ -1.89
PBX2-204	ENST00000495300	LCE1C	Q5T751	118 aa		3.22	□□□□□ -1.89
PBX2-204	ENST00000495300	LCE1B	Q5T7P3	118 aa		3.22	□□□□□ -1.89
PBX2-204	ENST00000495300	LCE3E	Q5T5B0	92 aa		3.1	□□□□□ -1.91
PBX2-204	ENST00000495300	LCE1F	Q5T754	118 aa		2.89	□□□□□ -1.95
PBX2-204	ENST00000495300	KRTAP21-2	Q3LI59	83 aa		2.75	□□□□□ -1.97
PBX2-204	ENST00000495300	PHGR1	C9JFL3	82 aa		2.49	□□□□□ -2.01
PBX2-204	ENST00000495300	PRM1	P04553	51 aa		2.43	□□□□□ -2.02
PBX2-204	ENST00000495300	MUC19	Q7Z5P9	8384 aa		2.24	□□□□□ -2.05
PBX2-204	ENST00000495300	KRTAP21-1	Q3LI58	79 aa		1.76	□□□□□ -2.13
PBX2-204	ENST00000495300	MUC16	Q8WXI7	14507 aa		1.61	□□□□□ -2.15

Retrieved 78 of 20,778 RNA–protein pairs in 69.8 ms