RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 MT1MQ8N339 61 aa5.52□□□□□ -1.53
LIMS2-216ENST00000494613 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
LIMS2-216ENST00000494613 UQCR11O14957 56 aa5.42□□□□□ -1.54
LIMS2-216ENST00000494613 TMEM258P61165 79 aa5.42□□□□□ -1.54
LIMS2-216ENST00000494613 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
LIMS2-216ENST00000494613 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
LIMS2-216ENST00000494613 MT4P47944 62 aa5.35□□□□□ -1.55
LIMS2-216ENST00000494613 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
LIMS2-216ENST00000494613 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
LIMS2-216ENST00000494613 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
LIMS2-216ENST00000494613 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
LIMS2-216ENST00000494613 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
LIMS2-216ENST00000494613 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
LIMS2-216ENST00000494613 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
LIMS2-216ENST00000494613 AHNAK2Q8IVF2 5795 aa5.2□□□□□ -1.58
LIMS2-216ENST00000494613 K7ERS5 55 aa5.18□□□□□ -1.58
LIMS2-216ENST00000494613 PSPHP1O15172 72 aa5.18□□□□□ -1.58
LIMS2-216ENST00000494613 V9GYY9 64 aa5.17□□□□□ -1.58
LIMS2-216ENST00000494613 Q1T7F1 81 aa5.15□□□□□ -1.59
LIMS2-216ENST00000494613 KRTAP5-10Q6L8G5 202 aa5.11□□□□□ -1.59
LIMS2-216ENST00000494613 KRTAP5-5Q701N2 237 aaPredicted RBP5.07□□□□□ -1.6
LIMS2-216ENST00000494613 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
LIMS2-216ENST00000494613 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
LIMS2-216ENST00000494613 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
LIMS2-216ENST00000494613 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
LIMS2-216ENST00000494613 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
LIMS2-216ENST00000494613 A6NED7 52 aa4.98□□□□□ -1.61
LIMS2-216ENST00000494613 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
LIMS2-216ENST00000494613 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
LIMS2-216ENST00000494613 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
LIMS2-216ENST00000494613 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
LIMS2-216ENST00000494613 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
LIMS2-216ENST00000494613 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
LIMS2-216ENST00000494613 RPS28P62857 69 aaKnown RBP4.85□□□□□ -1.63
LIMS2-216ENST00000494613 ROMO1P60602 79 aa4.84□□□□□ -1.63
LIMS2-216ENST00000494613 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
LIMS2-216ENST00000494613 PCP4P48539 62 aa4.83□□□□□ -1.64
LIMS2-216ENST00000494613 MT1AP04731 61 aa4.7□□□□□ -1.66
LIMS2-216ENST00000494613 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
LIMS2-216ENST00000494613 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
LIMS2-216ENST00000494613 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
LIMS2-216ENST00000494613 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
LIMS2-216ENST00000494613 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
LIMS2-216ENST00000494613 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
LIMS2-216ENST00000494613 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
LIMS2-216ENST00000494613 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
LIMS2-216ENST00000494613 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
LIMS2-216ENST00000494613 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
LIMS2-216ENST00000494613 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
LIMS2-216ENST00000494613 MT3P25713 68 aa4.33□□□□□ -1.72
LIMS2-216ENST00000494613 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
LIMS2-216ENST00000494613 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
LIMS2-216ENST00000494613 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
LIMS2-216ENST00000494613 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
LIMS2-216ENST00000494613 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
LIMS2-216ENST00000494613 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
LIMS2-216ENST00000494613 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
LIMS2-216ENST00000494613 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
LIMS2-216ENST00000494613 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
LIMS2-216ENST00000494613 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
LIMS2-216ENST00000494613 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
LIMS2-216ENST00000494613 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
LIMS2-216ENST00000494613 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
LIMS2-216ENST00000494613 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
LIMS2-216ENST00000494613 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
LIMS2-216ENST00000494613 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
LIMS2-216ENST00000494613 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
LIMS2-216ENST00000494613 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
LIMS2-216ENST00000494613 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
LIMS2-216ENST00000494613 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
LIMS2-216ENST00000494613 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
LIMS2-216ENST00000494613 PHGR1C9JFL3 82 aa3□□□□□ -1.93
LIMS2-216ENST00000494613 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
LIMS2-216ENST00000494613 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
LIMS2-216ENST00000494613 PRM1P04553 51 aa2.47□□□□□ -2.01
LIMS2-216ENST00000494613 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
LIMS2-216ENST00000494613 INE1O15225 51 aa1.97□□□□□ -2.09
LIMS2-216ENST00000494613 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 133 ms