RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 KRTAP10-10P60014 251 aa1.61□□□□□ -2.15
ATG3-207ENST00000494571 LCE1AQ5T7P2 110 aa1.6□□□□□ -2.15
ATG3-207ENST00000494571 FAT4Q6V0I7 4981 aa1.6□□□□□ -2.15
ATG3-207ENST00000494571 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
ATG3-207ENST00000494571 OBSCNQ5VST9 7968 aa1.58□□□□□ -2.16
ATG3-207ENST00000494571 KRTAP2-2Q9BYT5 123 aa1.58□□□□□ -2.16
ATG3-207ENST00000494571 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
ATG3-207ENST00000494571 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
ATG3-207ENST00000494571 KRTAP6-3Q3LI67 103 aa1.56□□□□□ -2.16
ATG3-207ENST00000494571 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
ATG3-207ENST00000494571 KRTAP10-12P60413 245 aa1.54□□□□□ -2.16
ATG3-207ENST00000494571 RNF213Q63HN8 5207 aa1.52□□□□□ -2.17
ATG3-207ENST00000494571 UBR4Q5T4S7 5183 aa1.51□□□□□ -2.17
ATG3-207ENST00000494571 KRTAP8-1Q8IUC2 63 aa1.51□□□□□ -2.17
ATG3-207ENST00000494571 KRTAP9-6A8MVA2 160 aa1.49□□□□□ -2.17
ATG3-207ENST00000494571 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
ATG3-207ENST00000494571 LCE1FQ5T754 118 aa1.47□□□□□ -2.17
ATG3-207ENST00000494571 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
ATG3-207ENST00000494571 LCE3CQ5T5A8 94 aa1.46□□□□□ -2.18
ATG3-207ENST00000494571 MUC2Q02817 5179 aa1.46□□□□□ -2.18
ATG3-207ENST00000494571 KRTAP20-1Q3LI63 56 aa1.45□□□□□ -2.18
ATG3-207ENST00000494571 M0R2T5 61 aa1.45□□□□□ -2.18
ATG3-207ENST00000494571 KRTAP10-5P60370 271 aa1.44□□□□□ -2.18
ATG3-207ENST00000494571 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
ATG3-207ENST00000494571 KRTAP19-2Q3LHN2 52 aa1.43□□□□□ -2.18
ATG3-207ENST00000494571 FLGP20930 4061 aaPredicted RBP1.43□□□□□ -2.18
ATG3-207ENST00000494571 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
ATG3-207ENST00000494571 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
ATG3-207ENST00000494571 MT1HP80294 61 aa1.42□□□□□ -2.18
ATG3-207ENST00000494571 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
ATG3-207ENST00000494571 MT3P25713 68 aa1.4□□□□□ -2.19
ATG3-207ENST00000494571 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
ATG3-207ENST00000494571 SPRR2GQ9BYE4 73 aa1.39□□□□□ -2.19
ATG3-207ENST00000494571 LCE3EQ5T5B0 92 aa1.37□□□□□ -2.19
ATG3-207ENST00000494571 MT1XP80297 61 aa1.36□□□□□ -2.19
ATG3-207ENST00000494571 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
ATG3-207ENST00000494571 KMT2DO14686 5537 aa1.36□□□□□ -2.19
ATG3-207ENST00000494571 SYNE1Q8NF91 8797 aaKnown RBP1.31□□□□□ -2.2
ATG3-207ENST00000494571 PRM1P04553 51 aa1.31□□□□□ -2.2
ATG3-207ENST00000494571 NEBP20929 6669 aa1.31□□□□□ -2.2
ATG3-207ENST00000494571 MT1FP04733 61 aa1.31□□□□□ -2.2
ATG3-207ENST00000494571 USH2AO75445 5202 aa1.3□□□□□ -2.2
ATG3-207ENST00000494571 MT1BP07438 61 aa1.29□□□□□ -2.2
ATG3-207ENST00000494571 MT2AP02795 61 aa1.28□□□□□ -2.2
ATG3-207ENST00000494571 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
ATG3-207ENST00000494571 KRTAP19-8Q3LI54 63 aa1.25□□□□□ -2.21
ATG3-207ENST00000494571 MT1GP13640 62 aa1.23□□□□□ -2.21
ATG3-207ENST00000494571 DSTQ03001 7570 aaKnown RBP1.23□□□□□ -2.21
ATG3-207ENST00000494571 LCE1CQ5T751 118 aa1.22□□□□□ -2.21
ATG3-207ENST00000494571 LCE1BQ5T7P3 118 aa1.22□□□□□ -2.21
ATG3-207ENST00000494571 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
ATG3-207ENST00000494571 KRTAP19-7Q3SYF9 63 aa1.2□□□□□ -2.22
ATG3-207ENST00000494571 MT1LQ93083 61 aa1.19□□□□□ -2.22
ATG3-207ENST00000494571 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
ATG3-207ENST00000494571 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
ATG3-207ENST00000494571 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
ATG3-207ENST00000494571 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.22
ATG3-207ENST00000494571 MT1EP04732 61 aa1.14□□□□□ -2.23
ATG3-207ENST00000494571 SPRR2EP22531 72 aa1.13□□□□□ -2.23
ATG3-207ENST00000494571 SPRR2BP35325 72 aa1.13□□□□□ -2.23
ATG3-207ENST00000494571 SPRR2AP35326 72 aa1.13□□□□□ -2.23
ATG3-207ENST00000494571 SPRR2DP22532 72 aa1.13□□□□□ -2.23
ATG3-207ENST00000494571 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.24
ATG3-207ENST00000494571 MT1AP04731 61 aa1.08□□□□□ -2.24
ATG3-207ENST00000494571 FSIP2Q5CZC0 6907 aa1.06□□□□□ -2.24
ATG3-207ENST00000494571 MT1MQ8N339 61 aa1.06□□□□□ -2.24
ATG3-207ENST00000494571 SYNE2Q8WXH0 6885 aaKnown RBP1.05□□□□□ -2.24
ATG3-207ENST00000494571 KRTAP6-1Q3LI64 71 aa1.05□□□□□ -2.24
ATG3-207ENST00000494571 SPRR2FQ96RM1 72 aa1.04□□□□□ -2.24
ATG3-207ENST00000494571 MACF1Q9UPN3 7388 aaKnown RBP1.02□□□□□ -2.25
ATG3-207ENST00000494571 MDN1Q9NU22 5596 aa1.02□□□□□ -2.25
ATG3-207ENST00000494571 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
ATG3-207ENST00000494571 KRTAP20-2Q3LI61 65 aa0.94□□□□□ -2.26
ATG3-207ENST00000494571 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
ATG3-207ENST00000494571 MT4P47944 62 aa0.84□□□□□ -2.28
ATG3-207ENST00000494571 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
ATG3-207ENST00000494571 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
ATG3-207ENST00000494571 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 87.6 ms