RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
LRCH3-219ENST00000494069 SEC61GP60059 68 aa3.22□□□□□ -1.89
LRCH3-219ENST00000494069 SPATA8Q6RVD6 105 aa3.22□□□□□ -1.89
LRCH3-219ENST00000494069 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
LRCH3-219ENST00000494069 TMEM258P61165 79 aa3.21□□□□□ -1.9
LRCH3-219ENST00000494069 MT1EP04732 61 aa3.19□□□□□ -1.9
LRCH3-219ENST00000494069 SERP1Q9Y6X1 66 aa3.19□□□□□ -1.9
LRCH3-219ENST00000494069 SPINT4Q6UDR6 99 aa3.18□□□□□ -1.9
LRCH3-219ENST00000494069 A0A1B0GU33 70 aa3.17□□□□□ -1.9
LRCH3-219ENST00000494069 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
LRCH3-219ENST00000494069 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
LRCH3-219ENST00000494069 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
LRCH3-219ENST00000494069 A8MU10 97 aa3.11□□□□□ -1.91
LRCH3-219ENST00000494069 A0A1B0GU69 56 aa3.08□□□□□ -1.92
LRCH3-219ENST00000494069 MT1GP13640 62 aa3.06□□□□□ -1.92
LRCH3-219ENST00000494069 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
LRCH3-219ENST00000494069 SMIM26A0A096LP01 95 aa3.05□□□□□ -1.92
LRCH3-219ENST00000494069 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
LRCH3-219ENST00000494069 MT1MQ8N339 61 aa3.04□□□□□ -1.92
LRCH3-219ENST00000494069 MT1LQ93083 61 aa3.04□□□□□ -1.92
LRCH3-219ENST00000494069 C10orf95Q9H7T3 257 aa3.04□□□□□ -1.92
LRCH3-219ENST00000494069 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
LRCH3-219ENST00000494069 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
LRCH3-219ENST00000494069 LINC01558Q9Y6Z2 57 aa3.03□□□□□ -1.92
LRCH3-219ENST00000494069 V9GYY9 64 aa3.03□□□□□ -1.92
LRCH3-219ENST00000494069 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
LRCH3-219ENST00000494069 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
LRCH3-219ENST00000494069 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
LRCH3-219ENST00000494069 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
LRCH3-219ENST00000494069 TNP1P09430 55 aa2.98□□□□□ -1.93
LRCH3-219ENST00000494069 Q1T7F1 81 aa2.98□□□□□ -1.93
LRCH3-219ENST00000494069 MT4P47944 62 aa2.97□□□□□ -1.93
LRCH3-219ENST00000494069 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
LRCH3-219ENST00000494069 UQCR11O14957 56 aa2.93□□□□□ -1.94
LRCH3-219ENST00000494069 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
LRCH3-219ENST00000494069 PSPHP1O15172 72 aa2.92□□□□□ -1.94
LRCH3-219ENST00000494069 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
LRCH3-219ENST00000494069 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
LRCH3-219ENST00000494069 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
LRCH3-219ENST00000494069 MIR22HGQ0VDD5 57 aa2.88□□□□□ -1.95
LRCH3-219ENST00000494069 A6NED7 52 aa2.85□□□□□ -1.95
LRCH3-219ENST00000494069 K7ERS5 55 aa2.82□□□□□ -1.96
LRCH3-219ENST00000494069 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
LRCH3-219ENST00000494069 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
LRCH3-219ENST00000494069 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
LRCH3-219ENST00000494069 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
LRCH3-219ENST00000494069 KRTAP25-1Q3LHN0 102 aa2.78□□□□□ -1.96
LRCH3-219ENST00000494069 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
LRCH3-219ENST00000494069 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
LRCH3-219ENST00000494069 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
LRCH3-219ENST00000494069 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
LRCH3-219ENST00000494069 BRK1Q8WUW1 75 aa2.69□□□□□ -1.98
LRCH3-219ENST00000494069 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
LRCH3-219ENST00000494069 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
LRCH3-219ENST00000494069 ROMO1P60602 79 aa2.63□□□□□ -1.99
LRCH3-219ENST00000494069 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
LRCH3-219ENST00000494069 MT1AP04731 61 aa2.57□□□□□ -2
LRCH3-219ENST00000494069 PMAIP1Q13794 54 aa2.55□□□□□ -2
LRCH3-219ENST00000494069 PRO0628Q9UI54 55 aa2.55□□□□□ -2
LRCH3-219ENST00000494069 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
LRCH3-219ENST00000494069 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
LRCH3-219ENST00000494069 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
LRCH3-219ENST00000494069 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
LRCH3-219ENST00000494069 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
LRCH3-219ENST00000494069 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
LRCH3-219ENST00000494069 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
LRCH3-219ENST00000494069 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
LRCH3-219ENST00000494069 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
LRCH3-219ENST00000494069 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
LRCH3-219ENST00000494069 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
LRCH3-219ENST00000494069 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
LRCH3-219ENST00000494069 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
LRCH3-219ENST00000494069 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
LRCH3-219ENST00000494069 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
LRCH3-219ENST00000494069 INE1O15225 51 aa1.53□□□□□ -2.16
LRCH3-219ENST00000494069 PRM1P04553 51 aa1.34□□□□□ -2.19
LRCH3-219ENST00000494069 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
LRCH3-219ENST00000494069 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 53.4 ms