RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
NEK4-205ENST00000493199 MUC12Q9UKN1 5478 aa2.15□□□□□ -2.07
NEK4-205ENST00000493199 C10orf95Q9H7T3 257 aa2.14□□□□□ -2.07
NEK4-205ENST00000493199 KRTAP10-12P60413 245 aa2.13□□□□□ -2.07
NEK4-205ENST00000493199 KRTAP5-9P26371 169 aa2.11□□□□□ -2.07
NEK4-205ENST00000493199 KRTAP8-1Q8IUC2 63 aa2.1□□□□□ -2.07
NEK4-205ENST00000493199 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
NEK4-205ENST00000493199 KMT2DO14686 5537 aa2.08□□□□□ -2.08
NEK4-205ENST00000493199 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
NEK4-205ENST00000493199 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
NEK4-205ENST00000493199 KRTAP10-7P60409 375 aaPredicted RBP2.07□□□□□ -2.08
NEK4-205ENST00000493199 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
NEK4-205ENST00000493199 KRTAP15-1Q3LI76 137 aa2.03□□□□□ -2.08
NEK4-205ENST00000493199 LCE3AQ5TA76 89 aa2.03□□□□□ -2.08
NEK4-205ENST00000493199 SVIPQ8NHG7 77 aa2.02□□□□□ -2.09
NEK4-205ENST00000493199 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
NEK4-205ENST00000493199 SPRR2FQ96RM1 72 aa2.01□□□□□ -2.09
NEK4-205ENST00000493199 KRTAP2-2Q9BYT5 123 aa2.01□□□□□ -2.09
NEK4-205ENST00000493199 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
NEK4-205ENST00000493199 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
NEK4-205ENST00000493199 SPRR2EP22531 72 aa1.98□□□□□ -2.09
NEK4-205ENST00000493199 SPRR2BP35325 72 aa1.98□□□□□ -2.09
NEK4-205ENST00000493199 SPRR2AP35326 72 aa1.98□□□□□ -2.09
NEK4-205ENST00000493199 KRTAP19-5Q3LI72 72 aa1.97□□□□□ -2.09
NEK4-205ENST00000493199 LCE1AQ5T7P2 110 aa1.96□□□□□ -2.1
NEK4-205ENST00000493199 PRAC1Q96KF2 57 aa1.96□□□□□ -2.1
NEK4-205ENST00000493199 MT1GP13640 62 aa1.94□□□□□ -2.1
NEK4-205ENST00000493199 MT1EP04732 61 aa1.92□□□□□ -2.1
NEK4-205ENST00000493199 SPRR2DP22532 72 aa1.92□□□□□ -2.1
NEK4-205ENST00000493199 KRTAP19-7Q3SYF9 63 aa1.92□□□□□ -2.1
NEK4-205ENST00000493199 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
NEK4-205ENST00000493199 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
NEK4-205ENST00000493199 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
NEK4-205ENST00000493199 MT1LQ93083 61 aa1.87□□□□□ -2.11
NEK4-205ENST00000493199 LUZP6Q538Z0 58 aa1.86□□□□□ -2.11
NEK4-205ENST00000493199 LCE3CQ5T5A8 94 aa1.86□□□□□ -2.11
NEK4-205ENST00000493199 DSTQ03001 7570 aaKnown RBP1.83□□□□□ -2.12
NEK4-205ENST00000493199 MT1MQ8N339 61 aa1.82□□□□□ -2.12
NEK4-205ENST00000493199 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
NEK4-205ENST00000493199 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
NEK4-205ENST00000493199 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
NEK4-205ENST00000493199 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
NEK4-205ENST00000493199 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
NEK4-205ENST00000493199 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
NEK4-205ENST00000493199 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
NEK4-205ENST00000493199 KRTAP4-3Q9BYR4 195 aa1.69□□□□□ -2.14
NEK4-205ENST00000493199 MT4P47944 62 aa1.68□□□□□ -2.14
NEK4-205ENST00000493199 KRTAP5-4Q6L8H1 288 aa1.68□□□□□ -2.14
NEK4-205ENST00000493199 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
NEK4-205ENST00000493199 MT1AP04731 61 aa1.63□□□□□ -2.15
NEK4-205ENST00000493199 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
NEK4-205ENST00000493199 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
NEK4-205ENST00000493199 KRTAP9-6A8MVA2 160 aa1.61□□□□□ -2.15
NEK4-205ENST00000493199 MT3P25713 68 aa1.59□□□□□ -2.15
NEK4-205ENST00000493199 NDUFAF8A1L188 74 aa1.58□□□□□ -2.16
NEK4-205ENST00000493199 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
NEK4-205ENST00000493199 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
NEK4-205ENST00000493199 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
NEK4-205ENST00000493199 A0A0A0MQY5 61 aa1.53□□□□□ -2.16
NEK4-205ENST00000493199 KRTAP6-2Q3LI66 62 aa1.47□□□□□ -2.17
NEK4-205ENST00000493199 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
NEK4-205ENST00000493199 OBSCNQ5VST9 7968 aa1.44□□□□□ -2.18
NEK4-205ENST00000493199 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
NEK4-205ENST00000493199 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
NEK4-205ENST00000493199 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
NEK4-205ENST00000493199 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
NEK4-205ENST00000493199 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
NEK4-205ENST00000493199 INE1O15225 51 aa1.41□□□□□ -2.18
NEK4-205ENST00000493199 LCE3EQ5T5B0 92 aa1.38□□□□□ -2.19
NEK4-205ENST00000493199 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
NEK4-205ENST00000493199 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
NEK4-205ENST00000493199 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
NEK4-205ENST00000493199 PRM1P04553 51 aa1.1□□□□□ -2.23
NEK4-205ENST00000493199 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
NEK4-205ENST00000493199 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
NEK4-205ENST00000493199 MUC19Q7Z5P9 8384 aa0.95□□□□□ -2.26
NEK4-205ENST00000493199 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
NEK4-205ENST00000493199 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms