RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 SPANXA2-OT1Q8N9U9 137 aa2.01□□□□□ -2.09
SEC13-219ENST00000492602 MT1EP04732 61 aa1.99□□□□□ -2.09
SEC13-219ENST00000492602 MT3P25713 68 aa1.99□□□□□ -2.09
SEC13-219ENST00000492602 SNURFQ9Y675 71 aa1.99□□□□□ -2.09
SEC13-219ENST00000492602 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
SEC13-219ENST00000492602 SERP2Q8N6R1 65 aa1.98□□□□□ -2.09
SEC13-219ENST00000492602 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
SEC13-219ENST00000492602 MT1GP13640 62 aa1.97□□□□□ -2.09
SEC13-219ENST00000492602 PP632Q6XCG6 107 aa1.97□□□□□ -2.09
SEC13-219ENST00000492602 A0A1B0GU33 70 aa1.95□□□□□ -2.1
SEC13-219ENST00000492602 SMIM26A0A096LP01 95 aa1.94□□□□□ -2.1
SEC13-219ENST00000492602 A0A0D9SG42 100 aa1.94□□□□□ -2.1
SEC13-219ENST00000492602 SPINT4Q6UDR6 99 aa1.94□□□□□ -2.1
SEC13-219ENST00000492602 COA5Q86WW8 74 aa1.93□□□□□ -2.1
SEC13-219ENST00000492602 MT1MQ8N339 61 aa1.93□□□□□ -2.1
SEC13-219ENST00000492602 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
SEC13-219ENST00000492602 A0A1B0GU69 56 aa1.91□□□□□ -2.1
SEC13-219ENST00000492602 PRR15LQ9BU68 103 aa1.91□□□□□ -2.1
SEC13-219ENST00000492602 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
SEC13-219ENST00000492602 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
SEC13-219ENST00000492602 COX7CP15954 63 aa1.88□□□□□ -2.11
SEC13-219ENST00000492602 TNP1P09430 55 aa1.87□□□□□ -2.11
SEC13-219ENST00000492602 SPATA8Q6RVD6 105 aa1.87□□□□□ -2.11
SEC13-219ENST00000492602 KRTAP13-4Q3LI77 160 aa1.86□□□□□ -2.11
SEC13-219ENST00000492602 LCE1FQ5T754 118 aa1.86□□□□□ -2.11
SEC13-219ENST00000492602 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
SEC13-219ENST00000492602 ANAPC13Q9BS18 74 aa1.84□□□□□ -2.11
SEC13-219ENST00000492602 K7ERS5 55 aa1.83□□□□□ -2.12
SEC13-219ENST00000492602 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
SEC13-219ENST00000492602 H7BZZ5 65 aa1.82□□□□□ -2.12
SEC13-219ENST00000492602 ATP5EP56381 51 aaPredicted RBP1.82□□□□□ -2.12
SEC13-219ENST00000492602 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
SEC13-219ENST00000492602 MT1LQ93083 61 aa1.82□□□□□ -2.12
SEC13-219ENST00000492602 KRTAP12-1P59990 96 aa1.81□□□□□ -2.12
SEC13-219ENST00000492602 UQCR11O14957 56 aa1.8□□□□□ -2.12
SEC13-219ENST00000492602 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
SEC13-219ENST00000492602 C10orf95Q9H7T3 257 aa1.8□□□□□ -2.12
SEC13-219ENST00000492602 A8MU10 97 aa1.77□□□□□ -2.13
SEC13-219ENST00000492602 LINC01558Q9Y6Z2 57 aa1.75□□□□□ -2.13
SEC13-219ENST00000492602 V9GYY9 64 aa1.74□□□□□ -2.13
SEC13-219ENST00000492602 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
SEC13-219ENST00000492602 KRTAP25-1Q3LHN0 102 aa1.73□□□□□ -2.13
SEC13-219ENST00000492602 LCE3CQ5T5A8 94 aa1.73□□□□□ -2.13
SEC13-219ENST00000492602 LCE3AQ5TA76 89 aa1.73□□□□□ -2.13
SEC13-219ENST00000492602 CCDC179H3BU77 68 aa1.72□□□□□ -2.13
SEC13-219ENST00000492602 TMEM258P61165 79 aa1.72□□□□□ -2.13
SEC13-219ENST00000492602 MIR22HGQ0VDD5 57 aa1.72□□□□□ -2.13
SEC13-219ENST00000492602 RPS28P62857 69 aaKnown RBP1.7□□□□□ -2.14
SEC13-219ENST00000492602 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
SEC13-219ENST00000492602 PRO0628Q9UI54 55 aa1.67□□□□□ -2.14
SEC13-219ENST00000492602 PSPHP1O15172 72 aa1.65□□□□□ -2.15
SEC13-219ENST00000492602 CDC42SE1Q9NRR8 79 aa1.64□□□□□ -2.15
SEC13-219ENST00000492602 A6NED7 52 aa1.63□□□□□ -2.15
SEC13-219ENST00000492602 Q1T7F1 81 aa1.62□□□□□ -2.15
SEC13-219ENST00000492602 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
SEC13-219ENST00000492602 LUZP6Q538Z0 58 aa1.59□□□□□ -2.15
SEC13-219ENST00000492602 LCE3EQ5T5B0 92 aa1.59□□□□□ -2.15
SEC13-219ENST00000492602 PMAIP1Q13794 54 aa1.58□□□□□ -2.16
SEC13-219ENST00000492602 LCE1EQ5T753 118 aa1.58□□□□□ -2.16
SEC13-219ENST00000492602 ROMO1P60602 79 aa1.57□□□□□ -2.16
SEC13-219ENST00000492602 KRTAP6-1Q3LI64 71 aa1.57□□□□□ -2.16
SEC13-219ENST00000492602 MT1AP04731 61 aa1.54□□□□□ -2.16
SEC13-219ENST00000492602 KTN1-AS1Q86SY8 53 aa1.49□□□□□ -2.17
SEC13-219ENST00000492602 KRTAP9-6A8MVA2 160 aa1.47□□□□□ -2.17
SEC13-219ENST00000492602 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
SEC13-219ENST00000492602 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
SEC13-219ENST00000492602 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
SEC13-219ENST00000492602 BRK1Q8WUW1 75 aa1.4□□□□□ -2.19
SEC13-219ENST00000492602 LCE3DQ9BYE3 92 aa1.37□□□□□ -2.19
SEC13-219ENST00000492602 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
SEC13-219ENST00000492602 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
SEC13-219ENST00000492602 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
SEC13-219ENST00000492602 INE1O15225 51 aa1.13□□□□□ -2.23
SEC13-219ENST00000492602 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
SEC13-219ENST00000492602 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
SEC13-219ENST00000492602 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
SEC13-219ENST00000492602 PRM1P04553 51 aa0.76□□□□□ -2.29
SEC13-219ENST00000492602 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 90.5 ms