RNA–Protein interactions for RNA: ENST00000491439.1

SNAP47-211, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 734 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-211ENST00000491439 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
SNAP47-211ENST00000491439 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
SNAP47-211ENST00000491439 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
SNAP47-211ENST00000491439 H7BZZ5 65 aa3.5□□□□□ -1.85
SNAP47-211ENST00000491439 COX7CP15954 63 aa3.5□□□□□ -1.85
SNAP47-211ENST00000491439 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
SNAP47-211ENST00000491439 SMIM26A0A096LP01 95 aa3.48□□□□□ -1.85
SNAP47-211ENST00000491439 A8MU10 97 aa3.48□□□□□ -1.85
SNAP47-211ENST00000491439 A0A1B0GU69 56 aa3.45□□□□□ -1.86
SNAP47-211ENST00000491439 TNP1P09430 55 aa3.45□□□□□ -1.86
SNAP47-211ENST00000491439 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
SNAP47-211ENST00000491439 PCP4P48539 62 aa3.44□□□□□ -1.86
SNAP47-211ENST00000491439 KRTAP4-7Q9BYR0 210 aa3.4□□□□□ -1.87
SNAP47-211ENST00000491439 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
SNAP47-211ENST00000491439 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
SNAP47-211ENST00000491439 KRTAP15-1Q3LI76 137 aa3.35□□□□□ -1.87
SNAP47-211ENST00000491439 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
SNAP47-211ENST00000491439 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
SNAP47-211ENST00000491439 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
SNAP47-211ENST00000491439 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
SNAP47-211ENST00000491439 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
SNAP47-211ENST00000491439 PRR15LQ9BU68 103 aa3.3□□□□□ -1.88
SNAP47-211ENST00000491439 ANAPC13Q9BS18 74 aa3.28□□□□□ -1.88
SNAP47-211ENST00000491439 LINC01558Q9Y6Z2 57 aa3.27□□□□□ -1.89
SNAP47-211ENST00000491439 CCDC179H3BU77 68 aa3.24□□□□□ -1.89
SNAP47-211ENST00000491439 ATP5EP56381 51 aaPredicted RBP3.24□□□□□ -1.89
SNAP47-211ENST00000491439 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
SNAP47-211ENST00000491439 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
SNAP47-211ENST00000491439 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
SNAP47-211ENST00000491439 UQCR11O14957 56 aa3.2□□□□□ -1.9
SNAP47-211ENST00000491439 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
SNAP47-211ENST00000491439 TMEM258P61165 79 aa3.13□□□□□ -1.91
SNAP47-211ENST00000491439 MIR22HGQ0VDD5 57 aa3.11□□□□□ -1.91
SNAP47-211ENST00000491439 RPS28P62857 69 aaKnown RBP3.09□□□□□ -1.91
SNAP47-211ENST00000491439 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
SNAP47-211ENST00000491439 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
SNAP47-211ENST00000491439 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
SNAP47-211ENST00000491439 K7ERS5 55 aa3.05□□□□□ -1.92
SNAP47-211ENST00000491439 MT1AP04731 61 aa3.04□□□□□ -1.92
SNAP47-211ENST00000491439 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
SNAP47-211ENST00000491439 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
SNAP47-211ENST00000491439 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
SNAP47-211ENST00000491439 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
SNAP47-211ENST00000491439 PSPHP1O15172 72 aa2.97□□□□□ -1.93
SNAP47-211ENST00000491439 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
SNAP47-211ENST00000491439 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
SNAP47-211ENST00000491439 Q1T7F1 81 aa2.94□□□□□ -1.94
SNAP47-211ENST00000491439 V9GYY9 64 aa2.94□□□□□ -1.94
SNAP47-211ENST00000491439 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
SNAP47-211ENST00000491439 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
SNAP47-211ENST00000491439 CDC42SE1Q9NRR8 79 aa2.89□□□□□ -1.95
SNAP47-211ENST00000491439 A6NED7 52 aa2.85□□□□□ -1.95
SNAP47-211ENST00000491439 ROMO1P60602 79 aa2.85□□□□□ -1.95
SNAP47-211ENST00000491439 MT3P25713 68 aa2.78□□□□□ -1.96
SNAP47-211ENST00000491439 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
SNAP47-211ENST00000491439 PRO0628Q9UI54 55 aa2.76□□□□□ -1.97
SNAP47-211ENST00000491439 BRK1Q8WUW1 75 aa2.72□□□□□ -1.97
SNAP47-211ENST00000491439 PRAC1Q96KF2 57 aa2.7□□□□□ -1.98
SNAP47-211ENST00000491439 PMAIP1Q13794 54 aa2.6□□□□□ -1.99
SNAP47-211ENST00000491439 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
SNAP47-211ENST00000491439 KTN1-AS1Q86SY8 53 aa2.54□□□□□ -2
SNAP47-211ENST00000491439 NDUFAF8A1L188 74 aa2.48□□□□□ -2.01
SNAP47-211ENST00000491439 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
SNAP47-211ENST00000491439 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
SNAP47-211ENST00000491439 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
SNAP47-211ENST00000491439 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
SNAP47-211ENST00000491439 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
SNAP47-211ENST00000491439 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
SNAP47-211ENST00000491439 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
SNAP47-211ENST00000491439 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
SNAP47-211ENST00000491439 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
SNAP47-211ENST00000491439 LUZP6Q538Z0 58 aa1.99□□□□□ -2.09
SNAP47-211ENST00000491439 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
SNAP47-211ENST00000491439 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
SNAP47-211ENST00000491439 INE1O15225 51 aa1.69□□□□□ -2.14
SNAP47-211ENST00000491439 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
SNAP47-211ENST00000491439 PRM1P04553 51 aa1.45□□□□□ -2.18
SNAP47-211ENST00000491439 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 108.7 ms