RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 SPATA8Q6RVD6 105 aa3.66□□□□□ -1.82
CMSS1-206ENST00000491299 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
CMSS1-206ENST00000491299 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
CMSS1-206ENST00000491299 A0A0D9SG42 100 aa3.62□□□□□ -1.83
CMSS1-206ENST00000491299 A8MU10 97 aa3.6□□□□□ -1.83
CMSS1-206ENST00000491299 UQCR11O14957 56 aa3.6□□□□□ -1.83
CMSS1-206ENST00000491299 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
CMSS1-206ENST00000491299 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
CMSS1-206ENST00000491299 A6NED7 52 aa3.57□□□□□ -1.84
CMSS1-206ENST00000491299 KMT2DO14686 5537 aa3.57□□□□□ -1.84
CMSS1-206ENST00000491299 MT1XP80297 61 aa3.57□□□□□ -1.84
CMSS1-206ENST00000491299 MIR22HGQ0VDD5 57 aa3.56□□□□□ -1.84
CMSS1-206ENST00000491299 KRTAP12-2P59991 146 aa3.55□□□□□ -1.84
CMSS1-206ENST00000491299 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
CMSS1-206ENST00000491299 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
CMSS1-206ENST00000491299 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
CMSS1-206ENST00000491299 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
CMSS1-206ENST00000491299 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
CMSS1-206ENST00000491299 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
CMSS1-206ENST00000491299 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
CMSS1-206ENST00000491299 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.86
CMSS1-206ENST00000491299 SPRR2EP22531 72 aa3.45□□□□□ -1.86
CMSS1-206ENST00000491299 SPRR2BP35325 72 aa3.45□□□□□ -1.86
CMSS1-206ENST00000491299 SPRR2AP35326 72 aa3.45□□□□□ -1.86
CMSS1-206ENST00000491299 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
CMSS1-206ENST00000491299 BRK1Q8WUW1 75 aa3.42□□□□□ -1.86
CMSS1-206ENST00000491299 K7ERS5 55 aa3.41□□□□□ -1.86
CMSS1-206ENST00000491299 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
CMSS1-206ENST00000491299 KRTAP2-1Q9BYU5 128 aa3.36□□□□□ -1.87
CMSS1-206ENST00000491299 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
CMSS1-206ENST00000491299 SPRR2DP22532 72 aa3.34□□□□□ -1.87
CMSS1-206ENST00000491299 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
CMSS1-206ENST00000491299 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
CMSS1-206ENST00000491299 TNP1P09430 55 aa3.26□□□□□ -1.89
CMSS1-206ENST00000491299 ROMO1P60602 79 aa3.26□□□□□ -1.89
CMSS1-206ENST00000491299 PRO0628Q9UI54 55 aa3.23□□□□□ -1.89
CMSS1-206ENST00000491299 PMAIP1Q13794 54 aa3.22□□□□□ -1.89
CMSS1-206ENST00000491299 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
CMSS1-206ENST00000491299 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
CMSS1-206ENST00000491299 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
CMSS1-206ENST00000491299 MT1EP04732 61 aa3.17□□□□□ -1.9
CMSS1-206ENST00000491299 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
CMSS1-206ENST00000491299 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
CMSS1-206ENST00000491299 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
CMSS1-206ENST00000491299 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
CMSS1-206ENST00000491299 MT1GP13640 62 aa3.1□□□□□ -1.91
CMSS1-206ENST00000491299 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
CMSS1-206ENST00000491299 MT1LQ93083 61 aa3.03□□□□□ -1.92
CMSS1-206ENST00000491299 KTN1-AS1Q86SY8 53 aa3.02□□□□□ -1.93
CMSS1-206ENST00000491299 MT1MQ8N339 61 aa3.02□□□□□ -1.93
CMSS1-206ENST00000491299 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
CMSS1-206ENST00000491299 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
CMSS1-206ENST00000491299 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
CMSS1-206ENST00000491299 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
CMSS1-206ENST00000491299 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
CMSS1-206ENST00000491299 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
CMSS1-206ENST00000491299 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
CMSS1-206ENST00000491299 MT4P47944 62 aa2.91□□□□□ -1.94
CMSS1-206ENST00000491299 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
CMSS1-206ENST00000491299 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
CMSS1-206ENST00000491299 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
CMSS1-206ENST00000491299 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
CMSS1-206ENST00000491299 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
CMSS1-206ENST00000491299 MT1AP04731 61 aa2.6□□□□□ -1.99
CMSS1-206ENST00000491299 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
CMSS1-206ENST00000491299 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
CMSS1-206ENST00000491299 MUC5ACP98088 5654 aa2.53□□□□□ -2
CMSS1-206ENST00000491299 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
CMSS1-206ENST00000491299 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
CMSS1-206ENST00000491299 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
CMSS1-206ENST00000491299 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
CMSS1-206ENST00000491299 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
CMSS1-206ENST00000491299 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
CMSS1-206ENST00000491299 INE1O15225 51 aa1.88□□□□□ -2.11
CMSS1-206ENST00000491299 PRM1P04553 51 aa1.71□□□□□ -2.14
CMSS1-206ENST00000491299 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
CMSS1-206ENST00000491299 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
CMSS1-206ENST00000491299 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 156.7 ms