RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 H0YAA0 97 aa3.41□□□□□ -1.86
USP39-216ENST00000490193 LOC101927531A0A1B0GV80 90 aa3.39□□□□□ -1.87
USP39-216ENST00000490193 PRR15LQ9BU68 103 aa3.39□□□□□ -1.87
USP39-216ENST00000490193 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
USP39-216ENST00000490193 P0C880 135 aa3.36□□□□□ -1.87
USP39-216ENST00000490193 TP53AIP1Q9HCN2 124 aa3.36□□□□□ -1.87
USP39-216ENST00000490193 CAMK2N1Q7Z7J9 78 aa3.34□□□□□ -1.87
USP39-216ENST00000490193 PLAC4Q8WY50 150 aa3.34□□□□□ -1.87
USP39-216ENST00000490193 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
USP39-216ENST00000490193 UBL5Q9BZL1 73 aa3.3□□□□□ -1.88
USP39-216ENST00000490193 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
USP39-216ENST00000490193 MT3P25713 68 aa3.27□□□□□ -1.89
USP39-216ENST00000490193 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
USP39-216ENST00000490193 H3BPC8 53 aa3.26□□□□□ -1.89
USP39-216ENST00000490193 LINC01558Q9Y6Z2 57 aa3.26□□□□□ -1.89
USP39-216ENST00000490193 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
USP39-216ENST00000490193 R4GN34 69 aa3.25□□□□□ -1.89
USP39-216ENST00000490193 LINC00208Q96KT6 92 aa3.23□□□□□ -1.89
USP39-216ENST00000490193 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
USP39-216ENST00000490193 M0QZ58 72 aa3.21□□□□□ -1.9
USP39-216ENST00000490193 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
USP39-216ENST00000490193 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
USP39-216ENST00000490193 DMAC1Q96GE9 116 aa3.18□□□□□ -1.9
USP39-216ENST00000490193 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
USP39-216ENST00000490193 H0Y9P7 68 aa3.17□□□□□ -1.9
USP39-216ENST00000490193 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
USP39-216ENST00000490193 SPATA8Q6RVD6 105 aa3.13□□□□□ -1.91
USP39-216ENST00000490193 UQCR11O14957 56 aa3.12□□□□□ -1.91
USP39-216ENST00000490193 COA5Q86WW8 74 aa3.11□□□□□ -1.91
USP39-216ENST00000490193 A0A1B0GU33 70 aa3.1□□□□□ -1.91
USP39-216ENST00000490193 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
USP39-216ENST00000490193 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
USP39-216ENST00000490193 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
USP39-216ENST00000490193 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
USP39-216ENST00000490193 MT1EP04732 61 aa3.07□□□□□ -1.92
USP39-216ENST00000490193 MT4P47944 62 aa3.07□□□□□ -1.92
USP39-216ENST00000490193 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
USP39-216ENST00000490193 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
USP39-216ENST00000490193 MT1GP13640 62 aa3□□□□□ -1.93
USP39-216ENST00000490193 A0A1B0GU69 56 aa2.99□□□□□ -1.93
USP39-216ENST00000490193 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
USP39-216ENST00000490193 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
USP39-216ENST00000490193 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
USP39-216ENST00000490193 MT1MQ8N339 61 aa2.94□□□□□ -1.94
USP39-216ENST00000490193 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
USP39-216ENST00000490193 ACYP2P14621 99 aa2.9□□□□□ -1.95
USP39-216ENST00000490193 KRTAP13-4Q3LI77 160 aa2.9□□□□□ -1.95
USP39-216ENST00000490193 MT1LQ93083 61 aa2.89□□□□□ -1.95
USP39-216ENST00000490193 A0A0D9SG42 100 aa2.88□□□□□ -1.95
USP39-216ENST00000490193 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
USP39-216ENST00000490193 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
USP39-216ENST00000490193 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
USP39-216ENST00000490193 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
USP39-216ENST00000490193 INE1O15225 51 aa2.73□□□□□ -1.97
USP39-216ENST00000490193 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
USP39-216ENST00000490193 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
USP39-216ENST00000490193 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
USP39-216ENST00000490193 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
USP39-216ENST00000490193 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
USP39-216ENST00000490193 TNP1P09430 55 aa2.65□□□□□ -1.99
USP39-216ENST00000490193 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.99
USP39-216ENST00000490193 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.99
USP39-216ENST00000490193 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
USP39-216ENST00000490193 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
USP39-216ENST00000490193 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
USP39-216ENST00000490193 MT1AP04731 61 aa2.46□□□□□ -2.02
USP39-216ENST00000490193 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
USP39-216ENST00000490193 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
USP39-216ENST00000490193 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
USP39-216ENST00000490193 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
USP39-216ENST00000490193 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
USP39-216ENST00000490193 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
USP39-216ENST00000490193 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
USP39-216ENST00000490193 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
USP39-216ENST00000490193 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
USP39-216ENST00000490193 PRM1P04553 51 aa1.51□□□□□ -2.17
USP39-216ENST00000490193 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
USP39-216ENST00000490193 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 39 ms