RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 SMIM11AP58511 58 aa-0.38□□□□□ -2.47
CPSF3-205ENST00000489629 S100A16Q96FQ6 103 aaKnown RBP-0.38□□□□□ -2.47
CPSF3-205ENST00000489629 KAAG1Q9UBP8 84 aa-0.38□□□□□ -2.47
CPSF3-205ENST00000489629 IGLV5-48A0A075B6I7 105 aa-0.39□□□□□ -2.47
CPSF3-205ENST00000489629 PRCDQ00LT1 54 aa-0.39□□□□□ -2.47
CPSF3-205ENST00000489629 V9GYS6 101 aa-0.39□□□□□ -2.47
CPSF3-205ENST00000489629 H3BUA1 57 aa-0.4□□□□□ -2.47
CPSF3-205ENST00000489629 CYB5AP00167 134 aa-0.4□□□□□ -2.47
CPSF3-205ENST00000489629 TNP1P09430 55 aa-0.41□□□□□ -2.48
CPSF3-205ENST00000489629 A0A087WWC5 75 aa-0.42□□□□□ -2.48
CPSF3-205ENST00000489629 PVALEFA0A1B0GWK0 134 aa-0.42□□□□□ -2.48
CPSF3-205ENST00000489629 CEBPZOSA8MTT3 80 aa-0.42□□□□□ -2.48
CPSF3-205ENST00000489629 SNRPFP62306 86 aaKnown RBP-0.42□□□□□ -2.48
CPSF3-205ENST00000489629 WT1-ASQ06250 92 aa-0.42□□□□□ -2.48
CPSF3-205ENST00000489629 LINC00643Q86TS7 51 aa-0.42□□□□□ -2.48
CPSF3-205ENST00000489629 DEFB106AQ8N104 65 aa-0.42□□□□□ -2.48
CPSF3-205ENST00000489629 C6orf48Q9UBA6 75 aa-0.43□□□□□ -2.48
CPSF3-205ENST00000489629 ETDCA0A1B0GVM5 59 aa-0.44□□□□□ -2.48
CPSF3-205ENST00000489629 NDUFA1O15239 70 aa-0.44□□□□□ -2.48
CPSF3-205ENST00000489629 RPL39P5Q59GN2 51 aa-0.44□□□□□ -2.48
CPSF3-205ENST00000489629 IAPPP10997 89 aa-0.45□□□□□ -2.48
CPSF3-205ENST00000489629 IFI6P09912 130 aa-0.46□□□□□ -2.48
CPSF3-205ENST00000489629 RPL38P63173 70 aaKnown RBP-0.46□□□□□ -2.48
CPSF3-205ENST00000489629 TOMM7Q9P0U1 55 aa-0.46□□□□□ -2.48
CPSF3-205ENST00000489629 MMP24-AS1A0A0U1RRL7 71 aa-0.47□□□□□ -2.48
CPSF3-205ENST00000489629 ACYP1P07311 99 aa-0.47□□□□□ -2.48
CPSF3-205ENST00000489629 POLR2KP53803 58 aaKnown RBP-0.47□□□□□ -2.48
CPSF3-205ENST00000489629 GNG2P59768 71 aa-0.47□□□□□ -2.48
CPSF3-205ENST00000489629 K7EIM0 57 aa-0.48□□□□□ -2.49
CPSF3-205ENST00000489629 C3orf79P0CE67 100 aa-0.48□□□□□ -2.49
CPSF3-205ENST00000489629 LINC00158P58513 81 aa-0.48□□□□□ -2.49
CPSF3-205ENST00000489629 SMIM2Q9BVW6 85 aa-0.48□□□□□ -2.49
CPSF3-205ENST00000489629 NDUFB1O75438 58 aa-0.49□□□□□ -2.49
CPSF3-205ENST00000489629 LINC01590Q5TEZ4 76 aa-0.49□□□□□ -2.49
CPSF3-205ENST00000489629 UMAD1C9J7I0 102 aa-0.5□□□□□ -2.49
CPSF3-205ENST00000489629 M0QY20 66 aa-0.5□□□□□ -2.49
CPSF3-205ENST00000489629 ARHGAP5-AS1Q96IT6 56 aa-0.5□□□□□ -2.49
CPSF3-205ENST00000489629 KANTRA0A1W2PQU2 76 aa-0.51□□□□□ -2.49
CPSF3-205ENST00000489629 ST20Q9HBF5 79 aa-0.51□□□□□ -2.49
CPSF3-205ENST00000489629 A0A087WXM4 84 aa-0.52□□□□□ -2.49
CPSF3-205ENST00000489629 H3BUT2 72 aa-0.52□□□□□ -2.49
CPSF3-205ENST00000489629 H3BVH4 76 aa-0.52□□□□□ -2.49
CPSF3-205ENST00000489629 PDCD5O14737 125 aa-0.52□□□□□ -2.49
CPSF3-205ENST00000489629 NREPQ16612 68 aa-0.52□□□□□ -2.49
CPSF3-205ENST00000489629 IFI27P40305 119 aaPredicted RBP-0.53□□□□□ -2.49
CPSF3-205ENST00000489629 ABRACLQ9P1F3 81 aa-0.53□□□□□ -2.49
CPSF3-205ENST00000489629 SMIM13P0DJ93 91 aa-0.54□□□□□ -2.5
CPSF3-205ENST00000489629 SNRPGP62308 76 aaKnown RBP-0.54□□□□□ -2.5
CPSF3-205ENST00000489629 ADIRFQ15847 76 aa-0.54□□□□□ -2.5
CPSF3-205ENST00000489629 NCBP2-AS2Q69YL0 99 aa-0.54□□□□□ -2.5
CPSF3-205ENST00000489629 KCNQ1DNQ9H478 68 aa-0.54□□□□□ -2.5
CPSF3-205ENST00000489629 BVES-AS1Q5T3Y7 98 aa-0.55□□□□□ -2.5
CPSF3-205ENST00000489629 SNRPGP15A8MWD9 76 aa-0.56□□□□□ -2.5
CPSF3-205ENST00000489629 CRIP1P50238 77 aa-0.56□□□□□ -2.5
CPSF3-205ENST00000489629 RPL39LQ96EH5 51 aaKnown RBP-0.56□□□□□ -2.5
CPSF3-205ENST00000489629 NMES1Q9C002 83 aa-0.56□□□□□ -2.5
CPSF3-205ENST00000489629 ATP5EP2Q5VTU8 51 aa-0.57□□□□□ -2.5
CPSF3-205ENST00000489629 S100A13Q99584 98 aa-0.57□□□□□ -2.5
CPSF3-205ENST00000489629 FCER1GP30273 86 aa-0.58□□□□□ -2.5
CPSF3-205ENST00000489629 RPL39P62891 51 aaKnown RBP-0.58□□□□□ -2.5
CPSF3-205ENST00000489629 C18orf32Q8TCD1 76 aa-0.6□□□□□ -2.51
CPSF3-205ENST00000489629 SMIM27A0A1W2PRY6 76 aa-0.61□□□□□ -2.51
CPSF3-205ENST00000489629 K7EMI3 77 aa-0.64□□□□□ -2.51
CPSF3-205ENST00000489629 UBL5Q9BZL1 73 aa-0.67□□□□□ -2.52
CPSF3-205ENST00000489629 LINC00308Q8TCZ7 52 aa-0.69□□□□□ -2.52
CPSF3-205ENST00000489629 CMC2Q9NRP2 79 aa-0.69□□□□□ -2.52
CPSF3-205ENST00000489629 IGIPA6NJ69 53 aa-0.71□□□□□ -2.52
CPSF3-205ENST00000489629 TMEM167BQ9NRX6 74 aa-0.74□□□□□ -2.53
CPSF3-205ENST00000489629 S100ZQ8WXG8 99 aa-0.75□□□□□ -2.53
CPSF3-205ENST00000489629 ATXN8Q156A1 80 aa-0.76□□□□□ -2.53
CPSF3-205ENST00000489629 PLNP26678 52 aa-0.77□□□□□ -2.53
CPSF3-205ENST00000489629 SMCO4Q9NRQ5 59 aa-0.78□□□□□ -2.53
CPSF3-205ENST00000489629 H0YGX0 51 aa-0.8□□□□□ -2.54
CPSF3-205ENST00000489629 GNG13Q9P2W3 67 aa-0.8□□□□□ -2.54
CPSF3-205ENST00000489629 LINC01549A6NIU2 74 aa-0.82□□□□□ -2.54
CPSF3-205ENST00000489629 SMIM31A0A1B0GVY4 71 aa-0.84□□□□□ -2.54
CPSF3-205ENST00000489629 SERF2P84101 59 aa-0.85□□□□□ -2.55
CPSF3-205ENST00000489629 TOMM5Q8N4H5 51 aa-0.9□□□□□ -2.55
Retrieved 78 of 20,778 RNA–protein pairs in 134 ms