RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 A6NED7 52 aa4.76□□□□□ -1.65
PHF1-210ENST00000488767 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
PHF1-210ENST00000488767 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
PHF1-210ENST00000488767 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
PHF1-210ENST00000488767 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
PHF1-210ENST00000488767 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
PHF1-210ENST00000488767 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
PHF1-210ENST00000488767 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
PHF1-210ENST00000488767 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
PHF1-210ENST00000488767 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
PHF1-210ENST00000488767 MT1GP13640 62 aa4.65□□□□□ -1.67
PHF1-210ENST00000488767 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
PHF1-210ENST00000488767 MT1LQ93083 61 aa4.59□□□□□ -1.67
PHF1-210ENST00000488767 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
PHF1-210ENST00000488767 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
PHF1-210ENST00000488767 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
PHF1-210ENST00000488767 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
PHF1-210ENST00000488767 H3BS24 57 aa4.56□□□□□ -1.68
PHF1-210ENST00000488767 MT1MQ8N339 61 aa4.53□□□□□ -1.68
PHF1-210ENST00000488767 ROMO1P60602 79 aa4.48□□□□□ -1.69
PHF1-210ENST00000488767 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
PHF1-210ENST00000488767 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
PHF1-210ENST00000488767 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
PHF1-210ENST00000488767 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
PHF1-210ENST00000488767 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
PHF1-210ENST00000488767 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
PHF1-210ENST00000488767 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
PHF1-210ENST00000488767 MT4P47944 62 aa4.25□□□□□ -1.73
PHF1-210ENST00000488767 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
PHF1-210ENST00000488767 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
PHF1-210ENST00000488767 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
PHF1-210ENST00000488767 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
PHF1-210ENST00000488767 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
PHF1-210ENST00000488767 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
PHF1-210ENST00000488767 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
PHF1-210ENST00000488767 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
PHF1-210ENST00000488767 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
PHF1-210ENST00000488767 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
PHF1-210ENST00000488767 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
PHF1-210ENST00000488767 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
PHF1-210ENST00000488767 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
PHF1-210ENST00000488767 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
PHF1-210ENST00000488767 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
PHF1-210ENST00000488767 MT1AP04731 61 aa3.92□□□□□ -1.78
PHF1-210ENST00000488767 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
PHF1-210ENST00000488767 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
PHF1-210ENST00000488767 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
PHF1-210ENST00000488767 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
PHF1-210ENST00000488767 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
PHF1-210ENST00000488767 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
PHF1-210ENST00000488767 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
PHF1-210ENST00000488767 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
PHF1-210ENST00000488767 MT3P25713 68 aa3.62□□□□□ -1.83
PHF1-210ENST00000488767 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
PHF1-210ENST00000488767 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
PHF1-210ENST00000488767 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
PHF1-210ENST00000488767 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
PHF1-210ENST00000488767 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
PHF1-210ENST00000488767 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
PHF1-210ENST00000488767 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
PHF1-210ENST00000488767 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
PHF1-210ENST00000488767 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
PHF1-210ENST00000488767 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
PHF1-210ENST00000488767 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
PHF1-210ENST00000488767 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
PHF1-210ENST00000488767 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
PHF1-210ENST00000488767 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
PHF1-210ENST00000488767 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
PHF1-210ENST00000488767 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
PHF1-210ENST00000488767 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
PHF1-210ENST00000488767 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
PHF1-210ENST00000488767 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
PHF1-210ENST00000488767 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
PHF1-210ENST00000488767 INE1O15225 51 aa2.29□□□□□ -2.04
PHF1-210ENST00000488767 PRM1P04553 51 aa2.27□□□□□ -2.05
PHF1-210ENST00000488767 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
PHF1-210ENST00000488767 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
PHF1-210ENST00000488767 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 248.2 ms