RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-215ENST00000488592 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
SCMH1-215ENST00000488592 SPINT4Q6UDR6 99 aa4.54□□□□□ -1.68
SCMH1-215ENST00000488592 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
SCMH1-215ENST00000488592 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
SCMH1-215ENST00000488592 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
SCMH1-215ENST00000488592 A0A1B0GU69 56 aa4.48□□□□□ -1.69
SCMH1-215ENST00000488592 MT1MQ8N339 61 aa4.47□□□□□ -1.69
SCMH1-215ENST00000488592 MT1LQ93083 61 aa4.46□□□□□ -1.7
SCMH1-215ENST00000488592 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
SCMH1-215ENST00000488592 TNP1P09430 55 aa4.41□□□□□ -1.7
SCMH1-215ENST00000488592 PCP4P48539 62 aa4.41□□□□□ -1.7
SCMH1-215ENST00000488592 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
SCMH1-215ENST00000488592 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
SCMH1-215ENST00000488592 PRR15LQ9BU68 103 aa4.39□□□□□ -1.71
SCMH1-215ENST00000488592 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
SCMH1-215ENST00000488592 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
SCMH1-215ENST00000488592 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
SCMH1-215ENST00000488592 MT4P47944 62 aa4.35□□□□□ -1.71
SCMH1-215ENST00000488592 A8MU10 97 aa4.34□□□□□ -1.71
SCMH1-215ENST00000488592 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
SCMH1-215ENST00000488592 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
SCMH1-215ENST00000488592 PSPHP1O15172 72 aa4.26□□□□□ -1.73
SCMH1-215ENST00000488592 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
SCMH1-215ENST00000488592 V9GYY9 64 aa4.25□□□□□ -1.73
SCMH1-215ENST00000488592 UQCR11O14957 56 aa4.24□□□□□ -1.73
SCMH1-215ENST00000488592 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
SCMH1-215ENST00000488592 Q1T7F1 81 aa4.23□□□□□ -1.73
SCMH1-215ENST00000488592 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
SCMH1-215ENST00000488592 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
SCMH1-215ENST00000488592 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
SCMH1-215ENST00000488592 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
SCMH1-215ENST00000488592 KRTAP25-1Q3LHN0 102 aa4.13□□□□□ -1.75
SCMH1-215ENST00000488592 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
SCMH1-215ENST00000488592 A6NED7 52 aa4.12□□□□□ -1.75
SCMH1-215ENST00000488592 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
SCMH1-215ENST00000488592 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
SCMH1-215ENST00000488592 K7ERS5 55 aa4.06□□□□□ -1.76
SCMH1-215ENST00000488592 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
SCMH1-215ENST00000488592 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
SCMH1-215ENST00000488592 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
SCMH1-215ENST00000488592 ROMO1P60602 79 aa3.83□□□□□ -1.8
SCMH1-215ENST00000488592 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
SCMH1-215ENST00000488592 MT1AP04731 61 aa3.81□□□□□ -1.8
SCMH1-215ENST00000488592 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
SCMH1-215ENST00000488592 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
SCMH1-215ENST00000488592 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
SCMH1-215ENST00000488592 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
SCMH1-215ENST00000488592 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
SCMH1-215ENST00000488592 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
SCMH1-215ENST00000488592 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
SCMH1-215ENST00000488592 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
SCMH1-215ENST00000488592 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
SCMH1-215ENST00000488592 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
SCMH1-215ENST00000488592 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
SCMH1-215ENST00000488592 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
SCMH1-215ENST00000488592 MT3P25713 68 aa3.5□□□□□ -1.85
SCMH1-215ENST00000488592 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
SCMH1-215ENST00000488592 PRO0628Q9UI54 55 aa3.45□□□□□ -1.86
SCMH1-215ENST00000488592 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
SCMH1-215ENST00000488592 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
SCMH1-215ENST00000488592 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
SCMH1-215ENST00000488592 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
SCMH1-215ENST00000488592 SVIPQ8NHG7 77 aa3.17□□□□□ -1.9
SCMH1-215ENST00000488592 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
SCMH1-215ENST00000488592 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
SCMH1-215ENST00000488592 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SCMH1-215ENST00000488592 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
SCMH1-215ENST00000488592 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
SCMH1-215ENST00000488592 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
SCMH1-215ENST00000488592 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
SCMH1-215ENST00000488592 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
SCMH1-215ENST00000488592 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
SCMH1-215ENST00000488592 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
SCMH1-215ENST00000488592 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SCMH1-215ENST00000488592 PRM1P04553 51 aa1.99□□□□□ -2.09
SCMH1-215ENST00000488592 INE1O15225 51 aa1.98□□□□□ -2.09
SCMH1-215ENST00000488592 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SCMH1-215ENST00000488592 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 90.4 ms