RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
RER1-207ENST00000488353 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
RER1-207ENST00000488353 MT1EP04732 61 aa4.81□□□□□ -1.64
RER1-207ENST00000488353 MT1LQ93083 61 aa4.8□□□□□ -1.64
RER1-207ENST00000488353 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
RER1-207ENST00000488353 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
RER1-207ENST00000488353 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
RER1-207ENST00000488353 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
RER1-207ENST00000488353 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
RER1-207ENST00000488353 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
RER1-207ENST00000488353 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
RER1-207ENST00000488353 MT1GP13640 62 aa4.55□□□□□ -1.68
RER1-207ENST00000488353 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
RER1-207ENST00000488353 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
RER1-207ENST00000488353 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
RER1-207ENST00000488353 MT1MQ8N339 61 aa4.52□□□□□ -1.69
RER1-207ENST00000488353 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
RER1-207ENST00000488353 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
RER1-207ENST00000488353 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
RER1-207ENST00000488353 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
RER1-207ENST00000488353 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
RER1-207ENST00000488353 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
RER1-207ENST00000488353 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
RER1-207ENST00000488353 SPRR2EP22531 72 aa4.26□□□□□ -1.73
RER1-207ENST00000488353 SPRR2BP35325 72 aa4.26□□□□□ -1.73
RER1-207ENST00000488353 SPRR2AP35326 72 aa4.26□□□□□ -1.73
RER1-207ENST00000488353 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
RER1-207ENST00000488353 MT1AP04731 61 aa4.2□□□□□ -1.74
RER1-207ENST00000488353 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
RER1-207ENST00000488353 NEBP20929 6669 aa4.14□□□□□ -1.75
RER1-207ENST00000488353 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
RER1-207ENST00000488353 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
RER1-207ENST00000488353 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
RER1-207ENST00000488353 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
RER1-207ENST00000488353 PRM1P04553 51 aa4.08□□□□□ -1.76
RER1-207ENST00000488353 SPRR2DP22532 72 aa4.08□□□□□ -1.76
RER1-207ENST00000488353 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
RER1-207ENST00000488353 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
RER1-207ENST00000488353 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.8
RER1-207ENST00000488353 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
RER1-207ENST00000488353 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
RER1-207ENST00000488353 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
RER1-207ENST00000488353 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
RER1-207ENST00000488353 MT4P47944 62 aa3.64□□□□□ -1.83
RER1-207ENST00000488353 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
RER1-207ENST00000488353 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
RER1-207ENST00000488353 MT3P25713 68 aa3.61□□□□□ -1.83
RER1-207ENST00000488353 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
RER1-207ENST00000488353 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
RER1-207ENST00000488353 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
RER1-207ENST00000488353 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
RER1-207ENST00000488353 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
RER1-207ENST00000488353 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
RER1-207ENST00000488353 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
RER1-207ENST00000488353 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
RER1-207ENST00000488353 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
RER1-207ENST00000488353 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
RER1-207ENST00000488353 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
RER1-207ENST00000488353 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
RER1-207ENST00000488353 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
RER1-207ENST00000488353 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
RER1-207ENST00000488353 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
RER1-207ENST00000488353 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
RER1-207ENST00000488353 KRTAP5-8O75690 187 aa2.84□□□□□ -1.96
RER1-207ENST00000488353 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
RER1-207ENST00000488353 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
RER1-207ENST00000488353 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
RER1-207ENST00000488353 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
RER1-207ENST00000488353 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
RER1-207ENST00000488353 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
RER1-207ENST00000488353 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
RER1-207ENST00000488353 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
RER1-207ENST00000488353 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
RER1-207ENST00000488353 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
RER1-207ENST00000488353 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
RER1-207ENST00000488353 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
RER1-207ENST00000488353 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 70 ms