RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
MECP2-210ENST00000488293 CCDC179H3BU77 68 aa4.84□□□□□ -1.63
MECP2-210ENST00000488293 MT1GP13640 62 aa4.84□□□□□ -1.63
MECP2-210ENST00000488293 ATP5EP56381 51 aaPredicted RBP4.83□□□□□ -1.64
MECP2-210ENST00000488293 PRR15LQ9BU68 103 aa4.82□□□□□ -1.64
MECP2-210ENST00000488293 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
MECP2-210ENST00000488293 TNP1P09430 55 aa4.78□□□□□ -1.64
MECP2-210ENST00000488293 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
MECP2-210ENST00000488293 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
MECP2-210ENST00000488293 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
MECP2-210ENST00000488293 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
MECP2-210ENST00000488293 MT1LQ93083 61 aa4.73□□□□□ -1.65
MECP2-210ENST00000488293 MT1MQ8N339 61 aa4.72□□□□□ -1.65
MECP2-210ENST00000488293 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
MECP2-210ENST00000488293 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
MECP2-210ENST00000488293 TMEM258P61165 79 aa4.67□□□□□ -1.66
MECP2-210ENST00000488293 UQCR11O14957 56 aa4.66□□□□□ -1.66
MECP2-210ENST00000488293 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
MECP2-210ENST00000488293 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
MECP2-210ENST00000488293 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
MECP2-210ENST00000488293 MT4P47944 62 aa4.55□□□□□ -1.68
MECP2-210ENST00000488293 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
MECP2-210ENST00000488293 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
MECP2-210ENST00000488293 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
MECP2-210ENST00000488293 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
MECP2-210ENST00000488293 K7ERS5 55 aa4.48□□□□□ -1.69
MECP2-210ENST00000488293 V9GYY9 64 aa4.46□□□□□ -1.7
MECP2-210ENST00000488293 PSPHP1O15172 72 aa4.41□□□□□ -1.7
MECP2-210ENST00000488293 Q1T7F1 81 aa4.41□□□□□ -1.7
MECP2-210ENST00000488293 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
MECP2-210ENST00000488293 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
MECP2-210ENST00000488293 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
MECP2-210ENST00000488293 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
MECP2-210ENST00000488293 A6NED7 52 aa4.27□□□□□ -1.73
MECP2-210ENST00000488293 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
MECP2-210ENST00000488293 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
MECP2-210ENST00000488293 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
MECP2-210ENST00000488293 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
MECP2-210ENST00000488293 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
MECP2-210ENST00000488293 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
MECP2-210ENST00000488293 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
MECP2-210ENST00000488293 ROMO1P60602 79 aa4.15□□□□□ -1.75
MECP2-210ENST00000488293 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
MECP2-210ENST00000488293 MT1AP04731 61 aa4.03□□□□□ -1.76
MECP2-210ENST00000488293 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
MECP2-210ENST00000488293 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
MECP2-210ENST00000488293 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
MECP2-210ENST00000488293 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
MECP2-210ENST00000488293 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
MECP2-210ENST00000488293 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
MECP2-210ENST00000488293 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
MECP2-210ENST00000488293 MT3P25713 68 aa3.7□□□□□ -1.82
MECP2-210ENST00000488293 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
MECP2-210ENST00000488293 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
MECP2-210ENST00000488293 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
MECP2-210ENST00000488293 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
MECP2-210ENST00000488293 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
MECP2-210ENST00000488293 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
MECP2-210ENST00000488293 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
MECP2-210ENST00000488293 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
MECP2-210ENST00000488293 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
MECP2-210ENST00000488293 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
MECP2-210ENST00000488293 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
MECP2-210ENST00000488293 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
MECP2-210ENST00000488293 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
MECP2-210ENST00000488293 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
MECP2-210ENST00000488293 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
MECP2-210ENST00000488293 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
MECP2-210ENST00000488293 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
MECP2-210ENST00000488293 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
MECP2-210ENST00000488293 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
MECP2-210ENST00000488293 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
MECP2-210ENST00000488293 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
MECP2-210ENST00000488293 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
MECP2-210ENST00000488293 INE1O15225 51 aa2.26□□□□□ -2.05
MECP2-210ENST00000488293 PRM1P04553 51 aa2.11□□□□□ -2.07
MECP2-210ENST00000488293 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
MECP2-210ENST00000488293 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 60.5 ms