RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ATP5EP56381 51 aaPredicted RBP3.24□□□□□ -1.89
PRKCB-208ENST00000487674 PRO0628Q9UI54 55 aa3.23□□□□□ -1.89
PRKCB-208ENST00000487674 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
PRKCB-208ENST00000487674 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
PRKCB-208ENST00000487674 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
PRKCB-208ENST00000487674 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
PRKCB-208ENST00000487674 MT1EP04732 61 aa3.2□□□□□ -1.9
PRKCB-208ENST00000487674 SEC61GP60059 68 aa3.2□□□□□ -1.9
PRKCB-208ENST00000487674 KRTAP13-4Q3LI77 160 aa3.2□□□□□ -1.9
PRKCB-208ENST00000487674 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
PRKCB-208ENST00000487674 SERP1Q9Y6X1 66 aa3.2□□□□□ -1.9
PRKCB-208ENST00000487674 V9GYY9 64 aa3.19□□□□□ -1.9
PRKCB-208ENST00000487674 COA5Q86WW8 74 aa3.18□□□□□ -1.9
PRKCB-208ENST00000487674 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
PRKCB-208ENST00000487674 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
PRKCB-208ENST00000487674 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
PRKCB-208ENST00000487674 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
PRKCB-208ENST00000487674 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
PRKCB-208ENST00000487674 A0A0D9SG42 100 aa3.1□□□□□ -1.91
PRKCB-208ENST00000487674 MT1GP13640 62 aa3.1□□□□□ -1.91
PRKCB-208ENST00000487674 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
PRKCB-208ENST00000487674 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
PRKCB-208ENST00000487674 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
PRKCB-208ENST00000487674 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
PRKCB-208ENST00000487674 Q1T7F1 81 aa3.07□□□□□ -1.92
PRKCB-208ENST00000487674 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
PRKCB-208ENST00000487674 MT4P47944 62 aa3.05□□□□□ -1.92
PRKCB-208ENST00000487674 MT1MQ8N339 61 aa3.05□□□□□ -1.92
PRKCB-208ENST00000487674 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
PRKCB-208ENST00000487674 SPINT4Q6UDR6 99 aa3.04□□□□□ -1.92
PRKCB-208ENST00000487674 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
PRKCB-208ENST00000487674 PMAIP1Q13794 54 aa3.03□□□□□ -1.92
PRKCB-208ENST00000487674 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.92
PRKCB-208ENST00000487674 MT1LQ93083 61 aa3.03□□□□□ -1.92
PRKCB-208ENST00000487674 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
PRKCB-208ENST00000487674 A0A1B0GU33 70 aa3.01□□□□□ -1.93
PRKCB-208ENST00000487674 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
PRKCB-208ENST00000487674 PSPHP1O15172 72 aa2.98□□□□□ -1.93
PRKCB-208ENST00000487674 BRK1Q8WUW1 75 aa2.98□□□□□ -1.93
PRKCB-208ENST00000487674 PRR15LQ9BU68 103 aa2.98□□□□□ -1.93
PRKCB-208ENST00000487674 C10orf95Q9H7T3 257 aa2.96□□□□□ -1.94
PRKCB-208ENST00000487674 A0A1B0GU69 56 aa2.95□□□□□ -1.94
PRKCB-208ENST00000487674 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
PRKCB-208ENST00000487674 A8MU10 97 aa2.93□□□□□ -1.94
PRKCB-208ENST00000487674 TNP1P09430 55 aa2.93□□□□□ -1.94
PRKCB-208ENST00000487674 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
PRKCB-208ENST00000487674 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
PRKCB-208ENST00000487674 A6NED7 52 aa2.86□□□□□ -1.95
PRKCB-208ENST00000487674 UQCR11O14957 56 aa2.85□□□□□ -1.95
PRKCB-208ENST00000487674 CDC42SE1Q9NRR8 79 aa2.85□□□□□ -1.95
PRKCB-208ENST00000487674 KRTAP12-3P60328 96 aa2.84□□□□□ -1.95
PRKCB-208ENST00000487674 MIR22HGQ0VDD5 57 aa2.83□□□□□ -1.96
PRKCB-208ENST00000487674 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
PRKCB-208ENST00000487674 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
PRKCB-208ENST00000487674 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
PRKCB-208ENST00000487674 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
PRKCB-208ENST00000487674 KRTAP25-1Q3LHN0 102 aa2.7□□□□□ -1.98
PRKCB-208ENST00000487674 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
PRKCB-208ENST00000487674 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
PRKCB-208ENST00000487674 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
PRKCB-208ENST00000487674 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
PRKCB-208ENST00000487674 K7ERS5 55 aa2.61□□□□□ -1.99
PRKCB-208ENST00000487674 ROMO1P60602 79 aa2.6□□□□□ -1.99
PRKCB-208ENST00000487674 MT1AP04731 61 aa2.58□□□□□ -2
PRKCB-208ENST00000487674 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
PRKCB-208ENST00000487674 LCE1CQ5T751 118 aa2.55□□□□□ -2
PRKCB-208ENST00000487674 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
PRKCB-208ENST00000487674 KRTAP5-8O75690 187 aa2.54□□□□□ -2
PRKCB-208ENST00000487674 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
PRKCB-208ENST00000487674 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
PRKCB-208ENST00000487674 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
PRKCB-208ENST00000487674 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
PRKCB-208ENST00000487674 INE1O15225 51 aa2.03□□□□□ -2.08
PRKCB-208ENST00000487674 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
PRKCB-208ENST00000487674 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
PRKCB-208ENST00000487674 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
PRKCB-208ENST00000487674 PRM1P04553 51 aa1.37□□□□□ -2.19
PRKCB-208ENST00000487674 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 15.9 ms