RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 UBR4Q5T4S7 5183 aa4.56□□□□□ -1.68
EPHB4-206ENST00000487222 FAT4Q6V0I7 4981 aa4.53□□□□□ -1.68
EPHB4-206ENST00000487222 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
EPHB4-206ENST00000487222 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
EPHB4-206ENST00000487222 MT3P25713 68 aa4.5□□□□□ -1.69
EPHB4-206ENST00000487222 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
EPHB4-206ENST00000487222 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
EPHB4-206ENST00000487222 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
EPHB4-206ENST00000487222 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
EPHB4-206ENST00000487222 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
EPHB4-206ENST00000487222 PRM1P04553 51 aa4.43□□□□□ -1.7
EPHB4-206ENST00000487222 HMCN2Q8NDA2 5059 aa4.43□□□□□ -1.7
EPHB4-206ENST00000487222 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
EPHB4-206ENST00000487222 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
EPHB4-206ENST00000487222 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
EPHB4-206ENST00000487222 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
EPHB4-206ENST00000487222 MT4P47944 62 aa4.32□□□□□ -1.72
EPHB4-206ENST00000487222 MT1AP04731 61 aa4.3□□□□□ -1.72
EPHB4-206ENST00000487222 MUC2Q02817 5179 aa4.3□□□□□ -1.72
EPHB4-206ENST00000487222 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
EPHB4-206ENST00000487222 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
EPHB4-206ENST00000487222 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
EPHB4-206ENST00000487222 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
EPHB4-206ENST00000487222 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.74
EPHB4-206ENST00000487222 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
EPHB4-206ENST00000487222 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
EPHB4-206ENST00000487222 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
EPHB4-206ENST00000487222 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
EPHB4-206ENST00000487222 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
EPHB4-206ENST00000487222 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
EPHB4-206ENST00000487222 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
EPHB4-206ENST00000487222 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
EPHB4-206ENST00000487222 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
EPHB4-206ENST00000487222 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
EPHB4-206ENST00000487222 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
EPHB4-206ENST00000487222 USH2AO75445 5202 aa3.87□□□□□ -1.79
EPHB4-206ENST00000487222 FCGBPQ9Y6R7 5405 aaPredicted RBP3.86□□□□□ -1.79
EPHB4-206ENST00000487222 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
EPHB4-206ENST00000487222 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
EPHB4-206ENST00000487222 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
EPHB4-206ENST00000487222 KMT2DO14686 5537 aa3.57□□□□□ -1.84
EPHB4-206ENST00000487222 MACF1Q9UPN3 7388 aaKnown RBP3.56□□□□□ -1.84
EPHB4-206ENST00000487222 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
EPHB4-206ENST00000487222 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
EPHB4-206ENST00000487222 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
EPHB4-206ENST00000487222 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
EPHB4-206ENST00000487222 SSPOA2VEC9 5147 aa3.46□□□□□ -1.86
EPHB4-206ENST00000487222 MUC12Q9UKN1 5478 aa3.43□□□□□ -1.86
EPHB4-206ENST00000487222 NEBP20929 6669 aa3.38□□□□□ -1.87
EPHB4-206ENST00000487222 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
EPHB4-206ENST00000487222 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
EPHB4-206ENST00000487222 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
EPHB4-206ENST00000487222 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
EPHB4-206ENST00000487222 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
EPHB4-206ENST00000487222 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
EPHB4-206ENST00000487222 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
EPHB4-206ENST00000487222 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
EPHB4-206ENST00000487222 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
EPHB4-206ENST00000487222 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
EPHB4-206ENST00000487222 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
EPHB4-206ENST00000487222 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
EPHB4-206ENST00000487222 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
EPHB4-206ENST00000487222 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
EPHB4-206ENST00000487222 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
EPHB4-206ENST00000487222 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
EPHB4-206ENST00000487222 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.01
EPHB4-206ENST00000487222 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
EPHB4-206ENST00000487222 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
EPHB4-206ENST00000487222 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
EPHB4-206ENST00000487222 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
EPHB4-206ENST00000487222 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
EPHB4-206ENST00000487222 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
EPHB4-206ENST00000487222 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
EPHB4-206ENST00000487222 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
EPHB4-206ENST00000487222 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
EPHB4-206ENST00000487222 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
EPHB4-206ENST00000487222 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
EPHB4-206ENST00000487222 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 86.6 ms