RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 SPRR2BP35325 72 aa5.5□□□□□ -1.53
POLR2J3-204ENST00000486319 SPRR2AP35326 72 aa5.5□□□□□ -1.53
POLR2J3-204ENST00000486319 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
POLR2J3-204ENST00000486319 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
POLR2J3-204ENST00000486319 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
POLR2J3-204ENST00000486319 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
POLR2J3-204ENST00000486319 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
POLR2J3-204ENST00000486319 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
POLR2J3-204ENST00000486319 KRTAP2-3P0C7H8 128 aa5.37□□□□□ -1.55
POLR2J3-204ENST00000486319 KRTAP2-4Q9BYR9 128 aa5.37□□□□□ -1.55
POLR2J3-204ENST00000486319 KRTAP19-7Q3SYF9 63 aa5.34□□□□□ -1.55
POLR2J3-204ENST00000486319 SPRR2DP22532 72 aa5.31□□□□□ -1.56
POLR2J3-204ENST00000486319 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
POLR2J3-204ENST00000486319 MT1EP04732 61 aa5.25□□□□□ -1.57
POLR2J3-204ENST00000486319 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
POLR2J3-204ENST00000486319 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
POLR2J3-204ENST00000486319 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
POLR2J3-204ENST00000486319 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
POLR2J3-204ENST00000486319 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
POLR2J3-204ENST00000486319 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
POLR2J3-204ENST00000486319 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
POLR2J3-204ENST00000486319 MT1LQ93083 61 aa5.16□□□□□ -1.58
POLR2J3-204ENST00000486319 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
POLR2J3-204ENST00000486319 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
POLR2J3-204ENST00000486319 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
POLR2J3-204ENST00000486319 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
POLR2J3-204ENST00000486319 MT1GP13640 62 aa5.02□□□□□ -1.61
POLR2J3-204ENST00000486319 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
POLR2J3-204ENST00000486319 MT1MQ8N339 61 aa4.94□□□□□ -1.62
POLR2J3-204ENST00000486319 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
POLR2J3-204ENST00000486319 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
POLR2J3-204ENST00000486319 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
POLR2J3-204ENST00000486319 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
POLR2J3-204ENST00000486319 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
POLR2J3-204ENST00000486319 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
POLR2J3-204ENST00000486319 MT4P47944 62 aa4.65□□□□□ -1.67
POLR2J3-204ENST00000486319 KRTAP5-4Q6L8H1 288 aa4.62□□□□□ -1.67
POLR2J3-204ENST00000486319 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
POLR2J3-204ENST00000486319 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
POLR2J3-204ENST00000486319 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
POLR2J3-204ENST00000486319 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
POLR2J3-204ENST00000486319 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
POLR2J3-204ENST00000486319 MT1AP04731 61 aa4.4□□□□□ -1.71
POLR2J3-204ENST00000486319 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
POLR2J3-204ENST00000486319 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
POLR2J3-204ENST00000486319 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
POLR2J3-204ENST00000486319 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
POLR2J3-204ENST00000486319 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
POLR2J3-204ENST00000486319 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
POLR2J3-204ENST00000486319 INE1O15225 51 aa4.21□□□□□ -1.73
POLR2J3-204ENST00000486319 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.73
POLR2J3-204ENST00000486319 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
POLR2J3-204ENST00000486319 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
POLR2J3-204ENST00000486319 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
POLR2J3-204ENST00000486319 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
POLR2J3-204ENST00000486319 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
POLR2J3-204ENST00000486319 MT3P25713 68 aa3.99□□□□□ -1.77
POLR2J3-204ENST00000486319 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
POLR2J3-204ENST00000486319 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
POLR2J3-204ENST00000486319 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
POLR2J3-204ENST00000486319 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
POLR2J3-204ENST00000486319 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
POLR2J3-204ENST00000486319 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
POLR2J3-204ENST00000486319 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
POLR2J3-204ENST00000486319 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
POLR2J3-204ENST00000486319 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
POLR2J3-204ENST00000486319 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
POLR2J3-204ENST00000486319 PRM1P04553 51 aa3.34□□□□□ -1.88
POLR2J3-204ENST00000486319 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.88
POLR2J3-204ENST00000486319 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
POLR2J3-204ENST00000486319 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
POLR2J3-204ENST00000486319 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
POLR2J3-204ENST00000486319 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
POLR2J3-204ENST00000486319 PHGR1C9JFL3 82 aa2.55□□□□□ -2
POLR2J3-204ENST00000486319 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
POLR2J3-204ENST00000486319 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
POLR2J3-204ENST00000486319 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
POLR2J3-204ENST00000486319 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 195.1 ms