RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
HDHD3-203ENST00000485934 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
HDHD3-203ENST00000485934 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
HDHD3-203ENST00000485934 MT1GP13640 62 aa5.56□□□□□ -1.52
HDHD3-203ENST00000485934 KRTAP2-2Q9BYT5 123 aa5.56□□□□□ -1.52
HDHD3-203ENST00000485934 KRTAP2-1Q9BYU5 128 aa5.56□□□□□ -1.52
HDHD3-203ENST00000485934 ROMO1P60602 79 aa5.54□□□□□ -1.52
HDHD3-203ENST00000485934 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
HDHD3-203ENST00000485934 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
HDHD3-203ENST00000485934 MT1LQ93083 61 aa5.48□□□□□ -1.53
HDHD3-203ENST00000485934 MT1MQ8N339 61 aa5.39□□□□□ -1.55
HDHD3-203ENST00000485934 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
HDHD3-203ENST00000485934 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
HDHD3-203ENST00000485934 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
HDHD3-203ENST00000485934 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
HDHD3-203ENST00000485934 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
HDHD3-203ENST00000485934 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
HDHD3-203ENST00000485934 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
HDHD3-203ENST00000485934 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
HDHD3-203ENST00000485934 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
HDHD3-203ENST00000485934 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
HDHD3-203ENST00000485934 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
HDHD3-203ENST00000485934 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
HDHD3-203ENST00000485934 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
HDHD3-203ENST00000485934 GPR98Q8WXG9 6306 aa4.94□□□□□ -1.62
HDHD3-203ENST00000485934 MT4P47944 62 aa4.94□□□□□ -1.62
HDHD3-203ENST00000485934 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
HDHD3-203ENST00000485934 HMCN1Q96RW7 5635 aa4.9□□□□□ -1.63
HDHD3-203ENST00000485934 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
HDHD3-203ENST00000485934 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
HDHD3-203ENST00000485934 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
HDHD3-203ENST00000485934 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
HDHD3-203ENST00000485934 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
HDHD3-203ENST00000485934 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
HDHD3-203ENST00000485934 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
HDHD3-203ENST00000485934 MT1AP04731 61 aa4.69□□□□□ -1.66
HDHD3-203ENST00000485934 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
HDHD3-203ENST00000485934 KRTAP5-10Q6L8G5 202 aa4.64□□□□□ -1.67
HDHD3-203ENST00000485934 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
HDHD3-203ENST00000485934 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
HDHD3-203ENST00000485934 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
HDHD3-203ENST00000485934 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
HDHD3-203ENST00000485934 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
HDHD3-203ENST00000485934 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
HDHD3-203ENST00000485934 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
HDHD3-203ENST00000485934 KRTAP5-2Q701N4 177 aa4.41□□□□□ -1.7
HDHD3-203ENST00000485934 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
HDHD3-203ENST00000485934 MT3P25713 68 aa4.34□□□□□ -1.71
HDHD3-203ENST00000485934 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
HDHD3-203ENST00000485934 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
HDHD3-203ENST00000485934 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
HDHD3-203ENST00000485934 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
HDHD3-203ENST00000485934 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
HDHD3-203ENST00000485934 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
HDHD3-203ENST00000485934 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
HDHD3-203ENST00000485934 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
HDHD3-203ENST00000485934 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
HDHD3-203ENST00000485934 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
HDHD3-203ENST00000485934 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
HDHD3-203ENST00000485934 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
HDHD3-203ENST00000485934 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
HDHD3-203ENST00000485934 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
HDHD3-203ENST00000485934 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
HDHD3-203ENST00000485934 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
HDHD3-203ENST00000485934 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
HDHD3-203ENST00000485934 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
HDHD3-203ENST00000485934 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
HDHD3-203ENST00000485934 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
HDHD3-203ENST00000485934 INE1O15225 51 aa3.13□□□□□ -1.91
HDHD3-203ENST00000485934 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
HDHD3-203ENST00000485934 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
HDHD3-203ENST00000485934 H3BS24 57 aa2.95□□□□□ -1.94
HDHD3-203ENST00000485934 PRM1P04553 51 aa2.8□□□□□ -1.96
HDHD3-203ENST00000485934 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
HDHD3-203ENST00000485934 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
HDHD3-203ENST00000485934 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
HDHD3-203ENST00000485934 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
HDHD3-203ENST00000485934 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 8.1 ms