RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
FN1-222ENST00000485567 KRTAP6-2Q3LI66 62 aa0.5□□□□□ -2.33
FN1-222ENST00000485567 COX14Q96I36 57 aa0.5□□□□□ -2.33
FN1-222ENST00000485567 LRP1BQ9NZR2 4599 aa0.5□□□□□ -2.33
FN1-222ENST00000485567 SMR3BP02814 79 aaPredicted RBP0.49□□□□□ -2.33
FN1-222ENST00000485567 RNF213Q63HN8 5207 aa0.49□□□□□ -2.33
FN1-222ENST00000485567 STAB2Q8WWQ8 2551 aa0.49□□□□□ -2.33
FN1-222ENST00000485567 K7EIM0 57 aa0.48□□□□□ -2.33
FN1-222ENST00000485567 DEFB108BQ8NET1 73 aa0.48□□□□□ -2.33
FN1-222ENST00000485567 H3BUX3 64 aa0.47□□□□□ -2.33
FN1-222ENST00000485567 CMYA5Q8N3K9 4069 aa0.47□□□□□ -2.33
FN1-222ENST00000485567 NEBP20929 6669 aa0.47□□□□□ -2.33
FN1-222ENST00000485567 HMCN2Q8NDA2 5059 aa0.47□□□□□ -2.33
FN1-222ENST00000485567 MACF1Q9UPN3 7388 aaKnown RBP0.47□□□□□ -2.33
FN1-222ENST00000485567 KRTAP20-1Q3LI63 56 aa0.46□□□□□ -2.34
FN1-222ENST00000485567 KRTAP8-1Q8IUC2 63 aa0.46□□□□□ -2.34
FN1-222ENST00000485567 FLGP20930 4061 aaPredicted RBP0.46□□□□□ -2.34
FN1-222ENST00000485567 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
FN1-222ENST00000485567 GPR98Q8WXG9 6306 aa0.46□□□□□ -2.34
FN1-222ENST00000485567 DNAH6Q9C0G6 4158 aa0.46□□□□□ -2.34
FN1-222ENST00000485567 PKHD1P08F94 4074 aa0.45□□□□□ -2.34
FN1-222ENST00000485567 DEFB136Q30KP8 78 aa0.45□□□□□ -2.34
FN1-222ENST00000485567 FAT3Q8TDW7 4589 aa0.45□□□□□ -2.34
FN1-222ENST00000485567 DEFB4AO15263 64 aa0.44□□□□□ -2.34
FN1-222ENST00000485567 STARD9Q9P2P6 4700 aa0.43□□□□□ -2.34
FN1-222ENST00000485567 DNAH7Q8WXX0 4024 aa0.43□□□□□ -2.34
FN1-222ENST00000485567 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
FN1-222ENST00000485567 MT1AP04731 61 aa0.43□□□□□ -2.34
FN1-222ENST00000485567 HTN3P15516 51 aa0.43□□□□□ -2.34
FN1-222ENST00000485567 SPRR2AP35326 72 aa0.43□□□□□ -2.34
FN1-222ENST00000485567 TMEM167AQ8TBQ9 72 aa0.43□□□□□ -2.34
FN1-222ENST00000485567 DYNC1H1Q14204 4646 aaKnown RBP0.43□□□□□ -2.34
FN1-222ENST00000485567 PLECQ15149 4684 aaKnown RBP0.43□□□□□ -2.34
FN1-222ENST00000485567 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
FN1-222ENST00000485567 LRP2P98164 4655 aa0.42□□□□□ -2.34
FN1-222ENST00000485567 FAT1Q14517 4588 aa0.42□□□□□ -2.34
FN1-222ENST00000485567 SSPOA2VEC9 5147 aa0.42□□□□□ -2.34
FN1-222ENST00000485567 DNAH5Q8TE73 4624 aa0.41□□□□□ -2.34
FN1-222ENST00000485567 MT1HL1P0DM35 61 aa0.41□□□□□ -2.34
FN1-222ENST00000485567 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
FN1-222ENST00000485567 USH2AO75445 5202 aa0.4□□□□□ -2.35
FN1-222ENST00000485567 DSTQ03001 7570 aaKnown RBP0.39□□□□□ -2.35
FN1-222ENST00000485567 KMT2DO14686 5537 aa0.39□□□□□ -2.35
FN1-222ENST00000485567 KRTAP19-5Q3LI72 72 aa0.39□□□□□ -2.35
FN1-222ENST00000485567 APELAP0DMC3 54 aa0.38□□□□□ -2.35
FN1-222ENST00000485567 RPL39P5Q59GN2 51 aa0.38□□□□□ -2.35
FN1-222ENST00000485567 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
FN1-222ENST00000485567 DNAH17Q9UFH2 4485 aa0.37□□□□□ -2.35
FN1-222ENST00000485567 MUC12Q9UKN1 5478 aa0.37□□□□□ -2.35
FN1-222ENST00000485567 HTN1P15515 57 aa0.37□□□□□ -2.35
FN1-222ENST00000485567 SPRR2EP22531 72 aa0.37□□□□□ -2.35
FN1-222ENST00000485567 MT1HP80294 61 aa0.37□□□□□ -2.35
FN1-222ENST00000485567 RHPN1-AS1Q9BWJ2 59 aa0.37□□□□□ -2.35
FN1-222ENST00000485567 A0A096LNI7 61 aa0.36□□□□□ -2.35
FN1-222ENST00000485567 A0A096LPF7 62 aa0.36□□□□□ -2.35
FN1-222ENST00000485567 SPRR2FQ96RM1 72 aa0.36□□□□□ -2.35
FN1-222ENST00000485567 KRTAP19-6Q3LI70 58 aa0.35□□□□□ -2.35
FN1-222ENST00000485567 MUC17Q685J3 4493 aa0.34□□□□□ -2.36
FN1-222ENST00000485567 AHNAKQ09666 5890 aaKnown RBP0.33□□□□□ -2.36
FN1-222ENST00000485567 MT4P47944 62 aa0.33□□□□□ -2.36
FN1-222ENST00000485567 RPS29P62273 56 aaKnown RBP0.33□□□□□ -2.36
FN1-222ENST00000485567 LINC01556Q5JQF7 62 aa0.33□□□□□ -2.36
FN1-222ENST00000485567 MT2AP02795 61 aa0.32□□□□□ -2.36
FN1-222ENST00000485567 DEFB1P60022 68 aa0.32□□□□□ -2.36
FN1-222ENST00000485567 MT1FP04733 61 aa0.31□□□□□ -2.36
FN1-222ENST00000485567 KRTAP19-2Q3LHN2 52 aa0.31□□□□□ -2.36
FN1-222ENST00000485567 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
FN1-222ENST00000485567 MT1BP07438 61 aa0.24□□□□□ -2.37
FN1-222ENST00000485567 KRTAP20-2Q3LI61 65 aa0.24□□□□□ -2.37
FN1-222ENST00000485567 KRTAP19-8Q3LI54 63 aa0.22□□□□□ -2.37
FN1-222ENST00000485567 SPRR2GQ9BYE4 73 aa0.22□□□□□ -2.37
FN1-222ENST00000485567 MT1GP13640 62 aa0.21□□□□□ -2.38
FN1-222ENST00000485567 MT1XP80297 61 aa0.2□□□□□ -2.38
FN1-222ENST00000485567 MT1EP04732 61 aa0.19□□□□□ -2.38
FN1-222ENST00000485567 MT1MQ8N339 61 aa0.19□□□□□ -2.38
FN1-222ENST00000485567 KRTAP19-7Q3SYF9 63 aa0.17□□□□□ -2.38
FN1-222ENST00000485567 MT1LQ93083 61 aa0.17□□□□□ -2.38
FN1-222ENST00000485567 KRTAP6-1Q3LI64 71 aa0.14□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 77.9 ms