RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 CMYA5Q8N3K9 4069 aa0.48□□□□□ -2.33
RC3H1-205ENST00000484867 PKHD1L1Q86WI1 4243 aa0.48□□□□□ -2.33
RC3H1-205ENST00000484867 KMT2CQ8NEZ4 4911 aaKnown RBP0.48□□□□□ -2.33
RC3H1-205ENST00000484867 HSPG2P98160 4391 aa0.48□□□□□ -2.33
RC3H1-205ENST00000484867 ANK3Q12955 4377 aaKnown RBP0.48□□□□□ -2.33
RC3H1-205ENST00000484867 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
RC3H1-205ENST00000484867 KIAA1109Q2LD37 5005 aa0.46□□□□□ -2.34
RC3H1-205ENST00000484867 RYR1P21817 5038 aa0.46□□□□□ -2.34
RC3H1-205ENST00000484867 PKD1P98161 4303 aa0.46□□□□□ -2.34
RC3H1-205ENST00000484867 VPS13CQ709C8 3753 aa0.46□□□□□ -2.34
RC3H1-205ENST00000484867 RYR3Q15413 4870 aa0.46□□□□□ -2.34
RC3H1-205ENST00000484867 GPR98Q8WXG9 6306 aa0.45□□□□□ -2.34
RC3H1-205ENST00000484867 PLECQ15149 4684 aaKnown RBP0.45□□□□□ -2.34
RC3H1-205ENST00000484867 DNAH17Q9UFH2 4485 aa0.45□□□□□ -2.34
RC3H1-205ENST00000484867 KRTAP19-5Q3LI72 72 aa0.45□□□□□ -2.34
RC3H1-205ENST00000484867 EPPK1P58107 5090 aaKnown RBP0.45□□□□□ -2.34
RC3H1-205ENST00000484867 DNAH6Q9C0G6 4158 aa0.44□□□□□ -2.34
RC3H1-205ENST00000484867 APOBP04114 4563 aaKnown RBP0.44□□□□□ -2.34
RC3H1-205ENST00000484867 SPRR2DP22532 72 aa0.44□□□□□ -2.34
RC3H1-205ENST00000484867 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
RC3H1-205ENST00000484867 HUWE1Q7Z6Z7 4374 aaKnown RBP0.44□□□□□ -2.34
RC3H1-205ENST00000484867 BIRC6Q9NR09 4857 aa0.44□□□□□ -2.34
RC3H1-205ENST00000484867 DNAH1Q9P2D7 4330 aa0.43□□□□□ -2.34
RC3H1-205ENST00000484867 DYNC1H1Q14204 4646 aaKnown RBP0.43□□□□□ -2.34
RC3H1-205ENST00000484867 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
RC3H1-205ENST00000484867 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
RC3H1-205ENST00000484867 RPS29P62273 56 aaKnown RBP0.42□□□□□ -2.34
RC3H1-205ENST00000484867 LRP1Q07954 4544 aaKnown RBP0.42□□□□□ -2.34
RC3H1-205ENST00000484867 DNAH5Q8TE73 4624 aa0.42□□□□□ -2.34
RC3H1-205ENST00000484867 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
RC3H1-205ENST00000484867 RYR2Q92736 4967 aa0.42□□□□□ -2.34
RC3H1-205ENST00000484867 ABCA13Q86UQ4 5058 aa0.41□□□□□ -2.34
RC3H1-205ENST00000484867 SPRR2BP35325 72 aa0.41□□□□□ -2.34
RC3H1-205ENST00000484867 MDN1Q9NU22 5596 aa0.4□□□□□ -2.34
RC3H1-205ENST00000484867 FAT1Q14517 4588 aa0.4□□□□□ -2.34
RC3H1-205ENST00000484867 HERC1Q15751 4861 aa0.4□□□□□ -2.34
RC3H1-205ENST00000484867 LPAP08519 4548 aa0.4□□□□□ -2.35
RC3H1-205ENST00000484867 RNF213Q63HN8 5207 aa0.4□□□□□ -2.35
RC3H1-205ENST00000484867 PKHD1P08F94 4074 aa0.4□□□□□ -2.35
RC3H1-205ENST00000484867 MT1AP04731 61 aa0.39□□□□□ -2.35
RC3H1-205ENST00000484867 MACF1Q9UPN3 7388 aaKnown RBP0.38□□□□□ -2.35
RC3H1-205ENST00000484867 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
RC3H1-205ENST00000484867 MUC17Q685J3 4493 aa0.38□□□□□ -2.35
RC3H1-205ENST00000484867 HERC2O95714 4834 aa0.37□□□□□ -2.35
RC3H1-205ENST00000484867 SSPOA2VEC9 5147 aa0.36□□□□□ -2.35
RC3H1-205ENST00000484867 LRP1BQ9NZR2 4599 aa0.36□□□□□ -2.35
RC3H1-205ENST00000484867 STARD9Q9P2P6 4700 aa0.35□□□□□ -2.35
RC3H1-205ENST00000484867 MT1GP13640 62 aa0.34□□□□□ -2.36
RC3H1-205ENST00000484867 SPRR2AP35326 72 aa0.34□□□□□ -2.36
RC3H1-205ENST00000484867 KRTAP20-1Q3LI63 56 aa0.34□□□□□ -2.36
RC3H1-205ENST00000484867 SPRR2FQ96RM1 72 aa0.34□□□□□ -2.36
RC3H1-205ENST00000484867 SYNE2Q8WXH0 6885 aaKnown RBP0.34□□□□□ -2.36
RC3H1-205ENST00000484867 KMT2DO14686 5537 aa0.34□□□□□ -2.36
RC3H1-205ENST00000484867 HMCN2Q8NDA2 5059 aa0.34□□□□□ -2.36
RC3H1-205ENST00000484867 NEBP20929 6669 aa0.34□□□□□ -2.36
RC3H1-205ENST00000484867 MT1XP80297 61 aa0.33□□□□□ -2.36
RC3H1-205ENST00000484867 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
RC3H1-205ENST00000484867 MT1EP04732 61 aa0.32□□□□□ -2.36
RC3H1-205ENST00000484867 SPRR2EP22531 72 aa0.32□□□□□ -2.36
RC3H1-205ENST00000484867 MT1LQ93083 61 aa0.31□□□□□ -2.36
RC3H1-205ENST00000484867 SPRR2GQ9BYE4 73 aa0.31□□□□□ -2.36
RC3H1-205ENST00000484867 DSTQ03001 7570 aaKnown RBP0.3□□□□□ -2.36
RC3H1-205ENST00000484867 MUC12Q9UKN1 5478 aa0.3□□□□□ -2.36
RC3H1-205ENST00000484867 USH2AO75445 5202 aa0.29□□□□□ -2.36
RC3H1-205ENST00000484867 KRTAP19-2Q3LHN2 52 aa0.29□□□□□ -2.36
RC3H1-205ENST00000484867 KRTAP6-1Q3LI64 71 aa0.29□□□□□ -2.36
RC3H1-205ENST00000484867 KRTAP19-7Q3SYF9 63 aa0.29□□□□□ -2.36
RC3H1-205ENST00000484867 LRP2P98164 4655 aa0.29□□□□□ -2.36
RC3H1-205ENST00000484867 MT1BP07438 61 aa0.27□□□□□ -2.37
RC3H1-205ENST00000484867 MT1HP80294 61 aa0.27□□□□□ -2.37
RC3H1-205ENST00000484867 KRTAP19-8Q3LI54 63 aa0.27□□□□□ -2.37
RC3H1-205ENST00000484867 MT1MQ8N339 61 aa0.24□□□□□ -2.37
RC3H1-205ENST00000484867 MT1FP04733 61 aa0.23□□□□□ -2.37
RC3H1-205ENST00000484867 MT2AP02795 61 aa0.22□□□□□ -2.37
RC3H1-205ENST00000484867 KRTAP19-6Q3LI70 58 aa0.2□□□□□ -2.38
RC3H1-205ENST00000484867 MT1HL1P0DM35 61 aa0.18□□□□□ -2.38
RC3H1-205ENST00000484867 MT4P47944 62 aa0.18□□□□□ -2.38
RC3H1-205ENST00000484867 KRTAP20-2Q3LI61 65 aa0.14□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 113.8 ms