RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 A0A1B0GU33 70 aa6.28□□□□□ -1.4
DDR1-245ENST00000484556 MT1LQ93083 61 aa6.27□□□□□ -1.41
DDR1-245ENST00000484556 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
DDR1-245ENST00000484556 A0A1B0GU69 56 aa6.25□□□□□ -1.41
DDR1-245ENST00000484556 AHNAKQ09666 5890 aaKnown RBP6.24□□□□□ -1.41
DDR1-245ENST00000484556 A0A0D9SG42 100 aa6.2□□□□□ -1.42
DDR1-245ENST00000484556 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
DDR1-245ENST00000484556 PRR15LQ9BU68 103 aa6.17□□□□□ -1.42
DDR1-245ENST00000484556 MUC5ACP98088 5654 aa6.15□□□□□ -1.42
DDR1-245ENST00000484556 SMIM26A0A096LP01 95 aa6.15□□□□□ -1.42
DDR1-245ENST00000484556 SPINT4Q6UDR6 99 aa6.12□□□□□ -1.43
DDR1-245ENST00000484556 SVIPQ8NHG7 77 aa6.12□□□□□ -1.43
DDR1-245ENST00000484556 MUC5BQ9HC84 5762 aaPredicted RBP6.09□□□□□ -1.44
DDR1-245ENST00000484556 KRTAP12-1P59990 96 aa6.07□□□□□ -1.44
DDR1-245ENST00000484556 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
DDR1-245ENST00000484556 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
DDR1-245ENST00000484556 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
DDR1-245ENST00000484556 KRTAP5-5Q701N2 237 aaPredicted RBP6□□□□□ -1.45
DDR1-245ENST00000484556 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
DDR1-245ENST00000484556 A8MU10 97 aa5.98□□□□□ -1.45
DDR1-245ENST00000484556 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
DDR1-245ENST00000484556 Q1T7F1 81 aa5.94□□□□□ -1.46
DDR1-245ENST00000484556 UQCR11O14957 56 aa5.92□□□□□ -1.46
DDR1-245ENST00000484556 KRTAP5-8O75690 187 aa5.91□□□□□ -1.46
DDR1-245ENST00000484556 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
DDR1-245ENST00000484556 V9GYY9 64 aa5.87□□□□□ -1.47
DDR1-245ENST00000484556 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
DDR1-245ENST00000484556 TNP1P09430 55 aa5.81□□□□□ -1.48
DDR1-245ENST00000484556 PSPHP1O15172 72 aa5.8□□□□□ -1.48
DDR1-245ENST00000484556 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
DDR1-245ENST00000484556 LOC100996750A0A140TA64 210 aa5.73□□□□□ -1.49
DDR1-245ENST00000484556 K7ERS5 55 aa5.73□□□□□ -1.49
DDR1-245ENST00000484556 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
DDR1-245ENST00000484556 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
DDR1-245ENST00000484556 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
DDR1-245ENST00000484556 BRK1Q8WUW1 75 aa5.59□□□□□ -1.51
DDR1-245ENST00000484556 A6NED7 52 aa5.58□□□□□ -1.52
DDR1-245ENST00000484556 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
DDR1-245ENST00000484556 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
DDR1-245ENST00000484556 PRO0628Q9UI54 55 aa5.54□□□□□ -1.52
DDR1-245ENST00000484556 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
DDR1-245ENST00000484556 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
DDR1-245ENST00000484556 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
DDR1-245ENST00000484556 MT1AP04731 61 aa5.31□□□□□ -1.56
DDR1-245ENST00000484556 ROMO1P60602 79 aa5.3□□□□□ -1.56
DDR1-245ENST00000484556 KRTAP6-2Q3LI66 62 aa5.3□□□□□ -1.56
DDR1-245ENST00000484556 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
DDR1-245ENST00000484556 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
DDR1-245ENST00000484556 KRTAP5-1Q6L8H4 278 aa5.26□□□□□ -1.57
DDR1-245ENST00000484556 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
DDR1-245ENST00000484556 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
DDR1-245ENST00000484556 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
DDR1-245ENST00000484556 KTN1-AS1Q86SY8 53 aa5.12□□□□□ -1.59
DDR1-245ENST00000484556 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
DDR1-245ENST00000484556 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
DDR1-245ENST00000484556 H3BS24 57 aa4.88□□□□□ -1.63
DDR1-245ENST00000484556 MT3P25713 68 aa4.87□□□□□ -1.63
DDR1-245ENST00000484556 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
DDR1-245ENST00000484556 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
DDR1-245ENST00000484556 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
DDR1-245ENST00000484556 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
DDR1-245ENST00000484556 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
DDR1-245ENST00000484556 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
DDR1-245ENST00000484556 PHGR1C9JFL3 82 aa4.23□□□□□ -1.73
DDR1-245ENST00000484556 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
DDR1-245ENST00000484556 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
DDR1-245ENST00000484556 NDUFAF8A1L188 74 aa4□□□□□ -1.77
DDR1-245ENST00000484556 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
DDR1-245ENST00000484556 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
DDR1-245ENST00000484556 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
DDR1-245ENST00000484556 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
DDR1-245ENST00000484556 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
DDR1-245ENST00000484556 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
DDR1-245ENST00000484556 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
DDR1-245ENST00000484556 INE1O15225 51 aa3.24□□□□□ -1.89
DDR1-245ENST00000484556 KRTAP21-1Q3LI58 79 aa3.18□□□□□ -1.9
DDR1-245ENST00000484556 PRM1P04553 51 aa2.68□□□□□ -1.98
DDR1-245ENST00000484556 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms