RNA–Protein interactions for RNA: ENST00000484358.1

RPL3-216, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-216ENST00000484358 KRTAP10-12P60413 245 aa5.34□□□□□ -1.55
RPL3-216ENST00000484358 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
RPL3-216ENST00000484358 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
RPL3-216ENST00000484358 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
RPL3-216ENST00000484358 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
RPL3-216ENST00000484358 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
RPL3-216ENST00000484358 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
RPL3-216ENST00000484358 KMT2DO14686 5537 aa5.23□□□□□ -1.57
RPL3-216ENST00000484358 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
RPL3-216ENST00000484358 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
RPL3-216ENST00000484358 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
RPL3-216ENST00000484358 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
RPL3-216ENST00000484358 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
RPL3-216ENST00000484358 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.59
RPL3-216ENST00000484358 SPRR2EP22531 72 aa5.08□□□□□ -1.6
RPL3-216ENST00000484358 SPRR2BP35325 72 aa5.08□□□□□ -1.6
RPL3-216ENST00000484358 SPRR2AP35326 72 aa5.08□□□□□ -1.6
RPL3-216ENST00000484358 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
RPL3-216ENST00000484358 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
RPL3-216ENST00000484358 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
RPL3-216ENST00000484358 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
RPL3-216ENST00000484358 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
RPL3-216ENST00000484358 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
RPL3-216ENST00000484358 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
RPL3-216ENST00000484358 MT1EP04732 61 aa4.93□□□□□ -1.62
RPL3-216ENST00000484358 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
RPL3-216ENST00000484358 SPRR2DP22532 72 aa4.92□□□□□ -1.62
RPL3-216ENST00000484358 MT1LQ93083 61 aa4.81□□□□□ -1.64
RPL3-216ENST00000484358 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
RPL3-216ENST00000484358 MT1GP13640 62 aa4.77□□□□□ -1.65
RPL3-216ENST00000484358 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
RPL3-216ENST00000484358 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
RPL3-216ENST00000484358 MT1MQ8N339 61 aa4.65□□□□□ -1.67
RPL3-216ENST00000484358 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
RPL3-216ENST00000484358 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
RPL3-216ENST00000484358 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
RPL3-216ENST00000484358 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
RPL3-216ENST00000484358 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
RPL3-216ENST00000484358 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
RPL3-216ENST00000484358 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
RPL3-216ENST00000484358 MT4P47944 62 aa4.31□□□□□ -1.72
RPL3-216ENST00000484358 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
RPL3-216ENST00000484358 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
RPL3-216ENST00000484358 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
RPL3-216ENST00000484358 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
RPL3-216ENST00000484358 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
RPL3-216ENST00000484358 MT1AP04731 61 aa4.12□□□□□ -1.75
RPL3-216ENST00000484358 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
RPL3-216ENST00000484358 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
RPL3-216ENST00000484358 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
RPL3-216ENST00000484358 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
RPL3-216ENST00000484358 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
RPL3-216ENST00000484358 MT3P25713 68 aa3.9□□□□□ -1.79
RPL3-216ENST00000484358 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
RPL3-216ENST00000484358 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
RPL3-216ENST00000484358 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
RPL3-216ENST00000484358 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
RPL3-216ENST00000484358 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
RPL3-216ENST00000484358 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
RPL3-216ENST00000484358 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
RPL3-216ENST00000484358 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
RPL3-216ENST00000484358 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
RPL3-216ENST00000484358 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
RPL3-216ENST00000484358 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
RPL3-216ENST00000484358 INE1O15225 51 aa3.49□□□□□ -1.85
RPL3-216ENST00000484358 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
RPL3-216ENST00000484358 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
RPL3-216ENST00000484358 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
RPL3-216ENST00000484358 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
RPL3-216ENST00000484358 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
RPL3-216ENST00000484358 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
RPL3-216ENST00000484358 PRM1P04553 51 aa2.86□□□□□ -1.95
RPL3-216ENST00000484358 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
RPL3-216ENST00000484358 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
RPL3-216ENST00000484358 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
RPL3-216ENST00000484358 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
RPL3-216ENST00000484358 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
RPL3-216ENST00000484358 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 79.7 ms