RNA–Protein interactions for RNA: ENST00000483595.1

PDCD4-207, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-207ENST00000483595 RNF213Q63HN8 5207 aa2.86□□□□□ -1.95
PDCD4-207ENST00000483595 TNP1P09430 55 aa2.85□□□□□ -1.95
PDCD4-207ENST00000483595 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
PDCD4-207ENST00000483595 MUC2Q02817 5179 aa2.85□□□□□ -1.95
PDCD4-207ENST00000483595 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
PDCD4-207ENST00000483595 MT1FP04733 61 aa2.83□□□□□ -1.96
PDCD4-207ENST00000483595 UBR4Q5T4S7 5183 aa2.78□□□□□ -1.96
PDCD4-207ENST00000483595 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
PDCD4-207ENST00000483595 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
PDCD4-207ENST00000483595 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
PDCD4-207ENST00000483595 MT1BP07438 61 aa2.72□□□□□ -1.97
PDCD4-207ENST00000483595 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
PDCD4-207ENST00000483595 MT1XP80297 61 aa2.67□□□□□ -1.98
PDCD4-207ENST00000483595 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
PDCD4-207ENST00000483595 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
PDCD4-207ENST00000483595 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
PDCD4-207ENST00000483595 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
PDCD4-207ENST00000483595 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
PDCD4-207ENST00000483595 KRTAP12-3P60328 96 aa2.55□□□□□ -2
PDCD4-207ENST00000483595 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
PDCD4-207ENST00000483595 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
PDCD4-207ENST00000483595 KRTAP19-5Q3LI72 72 aa2.44□□□□□ -2.02
PDCD4-207ENST00000483595 USH2AO75445 5202 aa2.43□□□□□ -2.02
PDCD4-207ENST00000483595 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
PDCD4-207ENST00000483595 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
PDCD4-207ENST00000483595 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
PDCD4-207ENST00000483595 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
PDCD4-207ENST00000483595 MT1EP04732 61 aa2.35□□□□□ -2.03
PDCD4-207ENST00000483595 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
PDCD4-207ENST00000483595 MT1LQ93083 61 aa2.32□□□□□ -2.04
PDCD4-207ENST00000483595 MT1GP13640 62 aa2.29□□□□□ -2.04
PDCD4-207ENST00000483595 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
PDCD4-207ENST00000483595 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
PDCD4-207ENST00000483595 CRCT1Q9UGL9 99 aa2.24□□□□□ -2.05
PDCD4-207ENST00000483595 INE1O15225 51 aa2.21□□□□□ -2.06
PDCD4-207ENST00000483595 MT1MQ8N339 61 aa2.2□□□□□ -2.06
PDCD4-207ENST00000483595 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
PDCD4-207ENST00000483595 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
PDCD4-207ENST00000483595 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
PDCD4-207ENST00000483595 KMT2DO14686 5537 aa2.16□□□□□ -2.06
PDCD4-207ENST00000483595 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
PDCD4-207ENST00000483595 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
PDCD4-207ENST00000483595 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
PDCD4-207ENST00000483595 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
PDCD4-207ENST00000483595 FSIP2Q5CZC0 6907 aa2.11□□□□□ -2.07
PDCD4-207ENST00000483595 SPRR2EP22531 72 aa2.06□□□□□ -2.08
PDCD4-207ENST00000483595 SPRR2BP35325 72 aa2.06□□□□□ -2.08
PDCD4-207ENST00000483595 SPRR2AP35326 72 aa2.06□□□□□ -2.08
PDCD4-207ENST00000483595 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
PDCD4-207ENST00000483595 MACF1Q9UPN3 7388 aaKnown RBP2.03□□□□□ -2.08
PDCD4-207ENST00000483595 MT1AP04731 61 aa2.01□□□□□ -2.09
PDCD4-207ENST00000483595 SPRR2DP22532 72 aa1.99□□□□□ -2.09
PDCD4-207ENST00000483595 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
PDCD4-207ENST00000483595 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
PDCD4-207ENST00000483595 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
PDCD4-207ENST00000483595 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
PDCD4-207ENST00000483595 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
PDCD4-207ENST00000483595 SYNE2Q8WXH0 6885 aaKnown RBP1.86□□□□□ -2.11
PDCD4-207ENST00000483595 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
PDCD4-207ENST00000483595 DSTQ03001 7570 aaKnown RBP1.82□□□□□ -2.12
PDCD4-207ENST00000483595 NEBP20929 6669 aa1.8□□□□□ -2.12
PDCD4-207ENST00000483595 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
PDCD4-207ENST00000483595 KRTAP20-1Q3LI63 56 aa1.73□□□□□ -2.13
PDCD4-207ENST00000483595 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.14
PDCD4-207ENST00000483595 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
PDCD4-207ENST00000483595 MT4P47944 62 aa1.66□□□□□ -2.14
PDCD4-207ENST00000483595 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
PDCD4-207ENST00000483595 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
PDCD4-207ENST00000483595 PRM1P04553 51 aa1.56□□□□□ -2.16
PDCD4-207ENST00000483595 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
PDCD4-207ENST00000483595 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
PDCD4-207ENST00000483595 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
PDCD4-207ENST00000483595 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
PDCD4-207ENST00000483595 GPR98Q8WXG9 6306 aa1.23□□□□□ -2.21
PDCD4-207ENST00000483595 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
PDCD4-207ENST00000483595 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
PDCD4-207ENST00000483595 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
PDCD4-207ENST00000483595 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 48.2 ms