RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
CPNE1-225ENST00000483495 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
CPNE1-225ENST00000483495 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
CPNE1-225ENST00000483495 MT1GP13640 62 aa4.5□□□□□ -1.69
CPNE1-225ENST00000483495 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
CPNE1-225ENST00000483495 MUC12Q9UKN1 5478 aa4.48□□□□□ -1.69
CPNE1-225ENST00000483495 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
CPNE1-225ENST00000483495 MT1MQ8N339 61 aa4.46□□□□□ -1.7
CPNE1-225ENST00000483495 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
CPNE1-225ENST00000483495 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
CPNE1-225ENST00000483495 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
CPNE1-225ENST00000483495 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
CPNE1-225ENST00000483495 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
CPNE1-225ENST00000483495 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
CPNE1-225ENST00000483495 INE1O15225 51 aa4.28□□□□□ -1.72
CPNE1-225ENST00000483495 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
CPNE1-225ENST00000483495 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
CPNE1-225ENST00000483495 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
CPNE1-225ENST00000483495 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
CPNE1-225ENST00000483495 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
CPNE1-225ENST00000483495 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
CPNE1-225ENST00000483495 SPRR2EP22531 72 aa4.21□□□□□ -1.74
CPNE1-225ENST00000483495 SPRR2BP35325 72 aa4.21□□□□□ -1.74
CPNE1-225ENST00000483495 SPRR2AP35326 72 aa4.21□□□□□ -1.74
CPNE1-225ENST00000483495 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
CPNE1-225ENST00000483495 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
CPNE1-225ENST00000483495 SPRR2DP22532 72 aa4.05□□□□□ -1.76
CPNE1-225ENST00000483495 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.77
CPNE1-225ENST00000483495 MT1AP04731 61 aa3.98□□□□□ -1.77
CPNE1-225ENST00000483495 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
CPNE1-225ENST00000483495 NEBP20929 6669 aa3.89□□□□□ -1.79
CPNE1-225ENST00000483495 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
CPNE1-225ENST00000483495 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
CPNE1-225ENST00000483495 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
CPNE1-225ENST00000483495 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
CPNE1-225ENST00000483495 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
CPNE1-225ENST00000483495 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
CPNE1-225ENST00000483495 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
CPNE1-225ENST00000483495 MT3P25713 68 aa3.59□□□□□ -1.83
CPNE1-225ENST00000483495 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
CPNE1-225ENST00000483495 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
CPNE1-225ENST00000483495 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
CPNE1-225ENST00000483495 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
CPNE1-225ENST00000483495 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
CPNE1-225ENST00000483495 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
CPNE1-225ENST00000483495 MT4P47944 62 aa3.5□□□□□ -1.85
CPNE1-225ENST00000483495 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
CPNE1-225ENST00000483495 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
CPNE1-225ENST00000483495 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
CPNE1-225ENST00000483495 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
CPNE1-225ENST00000483495 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
CPNE1-225ENST00000483495 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
CPNE1-225ENST00000483495 PRM1P04553 51 aa3.18□□□□□ -1.9
CPNE1-225ENST00000483495 LCE1EQ5T753 118 aa3.09□□□□□ -1.92
CPNE1-225ENST00000483495 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
CPNE1-225ENST00000483495 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.93
CPNE1-225ENST00000483495 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
CPNE1-225ENST00000483495 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
CPNE1-225ENST00000483495 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
CPNE1-225ENST00000483495 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
CPNE1-225ENST00000483495 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
CPNE1-225ENST00000483495 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
CPNE1-225ENST00000483495 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
CPNE1-225ENST00000483495 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
CPNE1-225ENST00000483495 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
CPNE1-225ENST00000483495 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
CPNE1-225ENST00000483495 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
CPNE1-225ENST00000483495 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
CPNE1-225ENST00000483495 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
CPNE1-225ENST00000483495 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
CPNE1-225ENST00000483495 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
CPNE1-225ENST00000483495 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
CPNE1-225ENST00000483495 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
CPNE1-225ENST00000483495 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
CPNE1-225ENST00000483495 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
CPNE1-225ENST00000483495 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
CPNE1-225ENST00000483495 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
CPNE1-225ENST00000483495 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 244.9 ms