RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 LOC105371267A0A1B0GV96 52 aa2.3□□□□□ -2.04
CSDE1-207ENST00000483407 MT-ATP8P03928 68 aa2.3□□□□□ -2.04
CSDE1-207ENST00000483407 DMAC1Q96GE9 116 aa2.28□□□□□ -2.04
CSDE1-207ENST00000483407 ANAPC13Q9BS18 74 aa2.28□□□□□ -2.04
CSDE1-207ENST00000483407 H3BPC8 53 aa2.27□□□□□ -2.05
CSDE1-207ENST00000483407 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
CSDE1-207ENST00000483407 LINC00643Q86TS7 51 aa2.27□□□□□ -2.05
CSDE1-207ENST00000483407 TRAV7A0A075B6U4 112 aa2.25□□□□□ -2.05
CSDE1-207ENST00000483407 SPTSSBQ8NFR3 76 aa2.25□□□□□ -2.05
CSDE1-207ENST00000483407 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
CSDE1-207ENST00000483407 K7ERS5 55 aa2.23□□□□□ -2.05
CSDE1-207ENST00000483407 ACYP2P14621 99 aa2.22□□□□□ -2.05
CSDE1-207ENST00000483407 SCGB1A1P11684 91 aa2.21□□□□□ -2.06
CSDE1-207ENST00000483407 CHKB-CPT1BH3BT56 60 aa2.2□□□□□ -2.06
CSDE1-207ENST00000483407 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
CSDE1-207ENST00000483407 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
CSDE1-207ENST00000483407 MT1EP04732 61 aa2.18□□□□□ -2.06
CSDE1-207ENST00000483407 CYSTM1Q9H1C7 97 aa2.17□□□□□ -2.06
CSDE1-207ENST00000483407 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CSDE1-207ENST00000483407 PP632Q6XCG6 107 aa2.15□□□□□ -2.07
CSDE1-207ENST00000483407 J3QR89 54 aa2.14□□□□□ -2.07
CSDE1-207ENST00000483407 MT1GP13640 62 aa2.14□□□□□ -2.07
CSDE1-207ENST00000483407 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
CSDE1-207ENST00000483407 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
CSDE1-207ENST00000483407 A0A1B0GU33 70 aa2.13□□□□□ -2.07
CSDE1-207ENST00000483407 A6NED7 52 aa2.13□□□□□ -2.07
CSDE1-207ENST00000483407 MT4P47944 62 aa2.13□□□□□ -2.07
CSDE1-207ENST00000483407 KRTAP13-4Q3LI77 160 aa2.13□□□□□ -2.07
CSDE1-207ENST00000483407 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
CSDE1-207ENST00000483407 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
CSDE1-207ENST00000483407 A0A0D9SG42 100 aa2.12□□□□□ -2.07
CSDE1-207ENST00000483407 SMIM20Q8N5G0 67 aa2.12□□□□□ -2.07
CSDE1-207ENST00000483407 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
CSDE1-207ENST00000483407 MT1MQ8N339 61 aa2.09□□□□□ -2.07
CSDE1-207ENST00000483407 SNURFQ9Y675 71 aa2.07□□□□□ -2.08
CSDE1-207ENST00000483407 SERP1Q9Y6X1 66 aa2.07□□□□□ -2.08
CSDE1-207ENST00000483407 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
CSDE1-207ENST00000483407 MT1LQ93083 61 aa2.06□□□□□ -2.08
CSDE1-207ENST00000483407 A0A1B0GV90 55 aa2.05□□□□□ -2.08
CSDE1-207ENST00000483407 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
CSDE1-207ENST00000483407 SPATA8Q6RVD6 105 aa2.04□□□□□ -2.08
CSDE1-207ENST00000483407 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
CSDE1-207ENST00000483407 COA5Q86WW8 74 aa2.02□□□□□ -2.09
CSDE1-207ENST00000483407 C10orf95Q9H7T3 257 aa2.01□□□□□ -2.09
CSDE1-207ENST00000483407 TNP1P09430 55 aa2□□□□□ -2.09
CSDE1-207ENST00000483407 K7ERU9 68 aa1.97□□□□□ -2.09
CSDE1-207ENST00000483407 SERP2Q8N6R1 65 aa1.97□□□□□ -2.09
CSDE1-207ENST00000483407 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
CSDE1-207ENST00000483407 A0A1B0GU69 56 aa1.94□□□□□ -2.1
CSDE1-207ENST00000483407 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
CSDE1-207ENST00000483407 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
CSDE1-207ENST00000483407 H7BZZ5 65 aa1.87□□□□□ -2.11
CSDE1-207ENST00000483407 COX7CP15954 63 aa1.87□□□□□ -2.11
CSDE1-207ENST00000483407 PRR15LQ9BU68 103 aa1.86□□□□□ -2.11
CSDE1-207ENST00000483407 PMAIP1Q13794 54 aa1.82□□□□□ -2.12
CSDE1-207ENST00000483407 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
CSDE1-207ENST00000483407 UQCR11O14957 56 aa1.78□□□□□ -2.12
CSDE1-207ENST00000483407 LINC01558Q9Y6Z2 57 aa1.77□□□□□ -2.13
CSDE1-207ENST00000483407 MT1AP04731 61 aa1.76□□□□□ -2.13
CSDE1-207ENST00000483407 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
CSDE1-207ENST00000483407 ATP5EP56381 51 aaPredicted RBP1.75□□□□□ -2.13
CSDE1-207ENST00000483407 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
CSDE1-207ENST00000483407 MIR22HGQ0VDD5 57 aa1.72□□□□□ -2.13
CSDE1-207ENST00000483407 CCDC179H3BU77 68 aa1.71□□□□□ -2.14
CSDE1-207ENST00000483407 TMEM258P61165 79 aa1.71□□□□□ -2.14
CSDE1-207ENST00000483407 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
CSDE1-207ENST00000483407 KTN1-AS1Q86SY8 53 aa1.7□□□□□ -2.14
CSDE1-207ENST00000483407 RPS28P62857 69 aaKnown RBP1.63□□□□□ -2.15
CSDE1-207ENST00000483407 CDC42SE1Q9NRR8 79 aa1.62□□□□□ -2.15
CSDE1-207ENST00000483407 Q1T7F1 81 aa1.59□□□□□ -2.15
CSDE1-207ENST00000483407 ROMO1P60602 79 aa1.57□□□□□ -2.16
CSDE1-207ENST00000483407 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
CSDE1-207ENST00000483407 BRK1Q8WUW1 75 aa1.4□□□□□ -2.19
CSDE1-207ENST00000483407 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
CSDE1-207ENST00000483407 INE1O15225 51 aa1.29□□□□□ -2.2
CSDE1-207ENST00000483407 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
CSDE1-207ENST00000483407 PRM1P04553 51 aa0.79□□□□□ -2.28
CSDE1-207ENST00000483407 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 34 ms