RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 NBEAL1Q6ZS30 2694 aa0.53□□□□□ -2.32
R3HDM1-216ENST00000483065 MT1HL1P0DM35 61 aa0.53□□□□□ -2.32
R3HDM1-216ENST00000483065 DNAH1Q9P2D7 4330 aa0.52□□□□□ -2.33
R3HDM1-216ENST00000483065 DNAH7Q8WXX0 4024 aa0.52□□□□□ -2.33
R3HDM1-216ENST00000483065 DNAH6Q9C0G6 4158 aa0.52□□□□□ -2.33
R3HDM1-216ENST00000483065 DNAH9Q9NYC9 4486 aa0.52□□□□□ -2.33
R3HDM1-216ENST00000483065 HECTD4Q9Y4D8 3996 aa0.51□□□□□ -2.33
R3HDM1-216ENST00000483065 DYNC2H1Q8NCM8 4307 aaKnown RBP0.51□□□□□ -2.33
R3HDM1-216ENST00000483065 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
R3HDM1-216ENST00000483065 VPS13DQ5THJ4 4388 aa0.51□□□□□ -2.33
R3HDM1-216ENST00000483065 KRTAP19-5Q3LI72 72 aa0.5□□□□□ -2.33
R3HDM1-216ENST00000483065 DNAH11Q96DT5 4516 aa0.5□□□□□ -2.33
R3HDM1-216ENST00000483065 DNAH2Q9P225 4427 aa0.5□□□□□ -2.33
R3HDM1-216ENST00000483065 PKHD1L1Q86WI1 4243 aa0.49□□□□□ -2.33
R3HDM1-216ENST00000483065 DNAH10Q8IVF4 4471 aa0.49□□□□□ -2.33
R3HDM1-216ENST00000483065 PKHD1P08F94 4074 aa0.49□□□□□ -2.33
R3HDM1-216ENST00000483065 DNAH8Q96JB1 4490 aa0.48□□□□□ -2.33
R3HDM1-216ENST00000483065 KRTAP19-2Q3LHN2 52 aa0.48□□□□□ -2.33
R3HDM1-216ENST00000483065 FLGP20930 4061 aaPredicted RBP0.48□□□□□ -2.33
R3HDM1-216ENST00000483065 HSPG2P98160 4391 aa0.48□□□□□ -2.33
R3HDM1-216ENST00000483065 DNAH17Q9UFH2 4485 aa0.47□□□□□ -2.33
R3HDM1-216ENST00000483065 HYDINQ4G0P3 5121 aa0.47□□□□□ -2.33
R3HDM1-216ENST00000483065 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
R3HDM1-216ENST00000483065 STARD9Q9P2P6 4700 aa0.46□□□□□ -2.34
R3HDM1-216ENST00000483065 PLECQ15149 4684 aaKnown RBP0.46□□□□□ -2.34
R3HDM1-216ENST00000483065 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
R3HDM1-216ENST00000483065 LRP1BQ9NZR2 4599 aa0.44□□□□□ -2.34
R3HDM1-216ENST00000483065 SPRR2GQ9BYE4 73 aa0.44□□□□□ -2.34
R3HDM1-216ENST00000483065 DNAH5Q8TE73 4624 aa0.44□□□□□ -2.34
R3HDM1-216ENST00000483065 MT1HP80294 61 aa0.43□□□□□ -2.34
R3HDM1-216ENST00000483065 DYNC1H1Q14204 4646 aaKnown RBP0.42□□□□□ -2.34
R3HDM1-216ENST00000483065 MT2AP02795 61 aa0.42□□□□□ -2.34
R3HDM1-216ENST00000483065 KRTAP19-8Q3LI54 63 aa0.42□□□□□ -2.34
R3HDM1-216ENST00000483065 FAT1Q14517 4588 aa0.41□□□□□ -2.34
R3HDM1-216ENST00000483065 MT1FP04733 61 aa0.41□□□□□ -2.34
R3HDM1-216ENST00000483065 MT1BP07438 61 aa0.41□□□□□ -2.34
R3HDM1-216ENST00000483065 MT1XP80297 61 aa0.41□□□□□ -2.34
R3HDM1-216ENST00000483065 FAT3Q8TDW7 4589 aa0.41□□□□□ -2.34
R3HDM1-216ENST00000483065 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
R3HDM1-216ENST00000483065 APOBP04114 4563 aaKnown RBP0.4□□□□□ -2.35
R3HDM1-216ENST00000483065 RYR1P21817 5038 aa0.4□□□□□ -2.35
R3HDM1-216ENST00000483065 DNHD1Q96M86 4753 aa0.4□□□□□ -2.35
R3HDM1-216ENST00000483065 RYR2Q92736 4967 aa0.39□□□□□ -2.35
R3HDM1-216ENST00000483065 LRP2P98164 4655 aa0.39□□□□□ -2.35
R3HDM1-216ENST00000483065 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
R3HDM1-216ENST00000483065 HMCN2Q8NDA2 5059 aa0.38□□□□□ -2.35
R3HDM1-216ENST00000483065 RYR3Q15413 4870 aa0.38□□□□□ -2.35
R3HDM1-216ENST00000483065 MUC17Q685J3 4493 aa0.38□□□□□ -2.35
R3HDM1-216ENST00000483065 ABCA13Q86UQ4 5058 aa0.37□□□□□ -2.35
R3HDM1-216ENST00000483065 KIAA1109Q2LD37 5005 aa0.37□□□□□ -2.35
R3HDM1-216ENST00000483065 KMT2CQ8NEZ4 4911 aaKnown RBP0.36□□□□□ -2.35
R3HDM1-216ENST00000483065 MT1EP04732 61 aa0.36□□□□□ -2.35
R3HDM1-216ENST00000483065 MT1GP13640 62 aa0.36□□□□□ -2.35
R3HDM1-216ENST00000483065 KRTAP19-6Q3LI70 58 aa0.36□□□□□ -2.35
R3HDM1-216ENST00000483065 KRTAP19-7Q3SYF9 63 aa0.36□□□□□ -2.35
R3HDM1-216ENST00000483065 MT1LQ93083 61 aa0.36□□□□□ -2.35
R3HDM1-216ENST00000483065 HERC1Q15751 4861 aa0.34□□□□□ -2.35
R3HDM1-216ENST00000483065 KMT2DO14686 5537 aa0.34□□□□□ -2.36
R3HDM1-216ENST00000483065 EPPK1P58107 5090 aaKnown RBP0.34□□□□□ -2.36
R3HDM1-216ENST00000483065 MT1MQ8N339 61 aa0.33□□□□□ -2.36
R3HDM1-216ENST00000483065 PCLOQ9Y6V0 5065 aa0.33□□□□□ -2.36
R3HDM1-216ENST00000483065 BIRC6Q9NR09 4857 aa0.32□□□□□ -2.36
R3HDM1-216ENST00000483065 HERC2O95714 4834 aa0.32□□□□□ -2.36
R3HDM1-216ENST00000483065 MUC2Q02817 5179 aa0.32□□□□□ -2.36
R3HDM1-216ENST00000483065 UBR4Q5T4S7 5183 aa0.32□□□□□ -2.36
R3HDM1-216ENST00000483065 RNF213Q63HN8 5207 aa0.31□□□□□ -2.36
R3HDM1-216ENST00000483065 KRTAP6-1Q3LI64 71 aa0.3□□□□□ -2.36
R3HDM1-216ENST00000483065 DSTQ03001 7570 aaKnown RBP0.29□□□□□ -2.36
R3HDM1-216ENST00000483065 USH2AO75445 5202 aa0.28□□□□□ -2.36
R3HDM1-216ENST00000483065 SSPOA2VEC9 5147 aa0.27□□□□□ -2.37
R3HDM1-216ENST00000483065 SYNE2Q8WXH0 6885 aaKnown RBP0.25□□□□□ -2.37
R3HDM1-216ENST00000483065 MT4P47944 62 aa0.24□□□□□ -2.37
R3HDM1-216ENST00000483065 MACF1Q9UPN3 7388 aaKnown RBP0.24□□□□□ -2.37
R3HDM1-216ENST00000483065 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
R3HDM1-216ENST00000483065 KRTAP20-1Q3LI63 56 aa0.23□□□□□ -2.37
R3HDM1-216ENST00000483065 MUC12Q9UKN1 5478 aa0.23□□□□□ -2.37
R3HDM1-216ENST00000483065 FSIP2Q5CZC0 6907 aa0.22□□□□□ -2.37
R3HDM1-216ENST00000483065 NEBP20929 6669 aa0.16□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 77.5 ms