RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 KRTAP9-7A8MTY7 169 aa3.53□□□□□ -1.84
TRIM27-205ENST00000481474 PKHD1L1Q86WI1 4243 aa3.52□□□□□ -1.85
TRIM27-205ENST00000481474 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
TRIM27-205ENST00000481474 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
TRIM27-205ENST00000481474 KIAA1109Q2LD37 5005 aa3.51□□□□□ -1.85
TRIM27-205ENST00000481474 TNXBP22105 4242 aa3.5□□□□□ -1.85
TRIM27-205ENST00000481474 KRTAP9-3Q9BYQ3 159 aa3.47□□□□□ -1.85
TRIM27-205ENST00000481474 MT1LQ93083 61 aa3.45□□□□□ -1.86
TRIM27-205ENST00000481474 KMT2CQ8NEZ4 4911 aaKnown RBP3.45□□□□□ -1.86
TRIM27-205ENST00000481474 HERC2O95714 4834 aa3.43□□□□□ -1.86
TRIM27-205ENST00000481474 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
TRIM27-205ENST00000481474 MT1MQ8N339 61 aa3.41□□□□□ -1.86
TRIM27-205ENST00000481474 MT1EP04732 61 aa3.4□□□□□ -1.86
TRIM27-205ENST00000481474 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
TRIM27-205ENST00000481474 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
TRIM27-205ENST00000481474 BIRC6Q9NR09 4857 aa3.26□□□□□ -1.89
TRIM27-205ENST00000481474 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
TRIM27-205ENST00000481474 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
TRIM27-205ENST00000481474 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
TRIM27-205ENST00000481474 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
TRIM27-205ENST00000481474 HERC1Q15751 4861 aa3.19□□□□□ -1.9
TRIM27-205ENST00000481474 RYR2Q92736 4967 aa3.18□□□□□ -1.9
TRIM27-205ENST00000481474 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
TRIM27-205ENST00000481474 EPPK1P58107 5090 aaKnown RBP3.18□□□□□ -1.9
TRIM27-205ENST00000481474 MUC2Q02817 5179 aa3.17□□□□□ -1.9
TRIM27-205ENST00000481474 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
TRIM27-205ENST00000481474 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
TRIM27-205ENST00000481474 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
TRIM27-205ENST00000481474 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
TRIM27-205ENST00000481474 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
TRIM27-205ENST00000481474 MT1AP04731 61 aa3.06□□□□□ -1.92
TRIM27-205ENST00000481474 KRTAP19-2Q3LHN2 52 aa3.05□□□□□ -1.92
TRIM27-205ENST00000481474 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
TRIM27-205ENST00000481474 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
TRIM27-205ENST00000481474 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
TRIM27-205ENST00000481474 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
TRIM27-205ENST00000481474 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
TRIM27-205ENST00000481474 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
TRIM27-205ENST00000481474 ABCA13Q86UQ4 5058 aa2.99□□□□□ -1.93
TRIM27-205ENST00000481474 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
TRIM27-205ENST00000481474 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
TRIM27-205ENST00000481474 KRTAP6-3Q3LI67 103 aa2.97□□□□□ -1.93
TRIM27-205ENST00000481474 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.94
TRIM27-205ENST00000481474 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
TRIM27-205ENST00000481474 KMT2DO14686 5537 aa2.94□□□□□ -1.94
TRIM27-205ENST00000481474 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
TRIM27-205ENST00000481474 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
TRIM27-205ENST00000481474 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
TRIM27-205ENST00000481474 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
TRIM27-205ENST00000481474 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
TRIM27-205ENST00000481474 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
TRIM27-205ENST00000481474 USH2AO75445 5202 aa2.65□□□□□ -1.98
TRIM27-205ENST00000481474 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
TRIM27-205ENST00000481474 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.02
TRIM27-205ENST00000481474 SSPOA2VEC9 5147 aa2.39□□□□□ -2.03
TRIM27-205ENST00000481474 NEBP20929 6669 aa2.32□□□□□ -2.04
TRIM27-205ENST00000481474 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
TRIM27-205ENST00000481474 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
TRIM27-205ENST00000481474 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
TRIM27-205ENST00000481474 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
TRIM27-205ENST00000481474 KRTAP5-4Q6L8H1 288 aa2.07□□□□□ -2.08
TRIM27-205ENST00000481474 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
TRIM27-205ENST00000481474 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
TRIM27-205ENST00000481474 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
TRIM27-205ENST00000481474 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
TRIM27-205ENST00000481474 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
TRIM27-205ENST00000481474 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
TRIM27-205ENST00000481474 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
TRIM27-205ENST00000481474 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
TRIM27-205ENST00000481474 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
TRIM27-205ENST00000481474 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
TRIM27-205ENST00000481474 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
TRIM27-205ENST00000481474 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.19
TRIM27-205ENST00000481474 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
TRIM27-205ENST00000481474 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
TRIM27-205ENST00000481474 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
TRIM27-205ENST00000481474 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
TRIM27-205ENST00000481474 KRTAP5-7Q6L8G8 165 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms