RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
PDCD4-206ENST00000481353 KMT2CQ8NEZ4 4911 aaKnown RBP3.4□□□□□ -1.86
PDCD4-206ENST00000481353 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
PDCD4-206ENST00000481353 LPAP08519 4548 aa3.36□□□□□ -1.87
PDCD4-206ENST00000481353 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
PDCD4-206ENST00000481353 HERC1Q15751 4861 aa3.32□□□□□ -1.88
PDCD4-206ENST00000481353 RYR3Q15413 4870 aa3.28□□□□□ -1.88
PDCD4-206ENST00000481353 FLGP20930 4061 aaPredicted RBP3.27□□□□□ -1.89
PDCD4-206ENST00000481353 KIAA1109Q2LD37 5005 aa3.24□□□□□ -1.89
PDCD4-206ENST00000481353 KRTAP19-8Q3LI54 63 aa3.24□□□□□ -1.89
PDCD4-206ENST00000481353 M0R2T5 61 aa3.21□□□□□ -1.9
PDCD4-206ENST00000481353 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
PDCD4-206ENST00000481353 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
PDCD4-206ENST00000481353 MT2AP02795 61 aa3.12□□□□□ -1.91
PDCD4-206ENST00000481353 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
PDCD4-206ENST00000481353 MT1HP80294 61 aa3.11□□□□□ -1.91
PDCD4-206ENST00000481353 BIRC6Q9NR09 4857 aa3.11□□□□□ -1.91
PDCD4-206ENST00000481353 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
PDCD4-206ENST00000481353 MT1FP04733 61 aa3.09□□□□□ -1.91
PDCD4-206ENST00000481353 MT1XP80297 61 aa3.09□□□□□ -1.91
PDCD4-206ENST00000481353 MT1BP07438 61 aa3.07□□□□□ -1.92
PDCD4-206ENST00000481353 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
PDCD4-206ENST00000481353 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
PDCD4-206ENST00000481353 HERC2O95714 4834 aa2.98□□□□□ -1.93
PDCD4-206ENST00000481353 EPPK1P58107 5090 aaKnown RBP2.97□□□□□ -1.93
PDCD4-206ENST00000481353 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
PDCD4-206ENST00000481353 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
PDCD4-206ENST00000481353 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
PDCD4-206ENST00000481353 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
PDCD4-206ENST00000481353 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
PDCD4-206ENST00000481353 PCLOQ9Y6V0 5065 aa2.87□□□□□ -1.95
PDCD4-206ENST00000481353 MUC2Q02817 5179 aa2.82□□□□□ -1.96
PDCD4-206ENST00000481353 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
PDCD4-206ENST00000481353 MT1EP04732 61 aa2.74□□□□□ -1.97
PDCD4-206ENST00000481353 UBR4Q5T4S7 5183 aa2.73□□□□□ -1.97
PDCD4-206ENST00000481353 MT1LQ93083 61 aa2.73□□□□□ -1.97
PDCD4-206ENST00000481353 FAT4Q6V0I7 4981 aa2.72□□□□□ -1.97
PDCD4-206ENST00000481353 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
PDCD4-206ENST00000481353 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
PDCD4-206ENST00000481353 MT1GP13640 62 aa2.58□□□□□ -2
PDCD4-206ENST00000481353 MT1AP04731 61 aa2.54□□□□□ -2
PDCD4-206ENST00000481353 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
PDCD4-206ENST00000481353 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
PDCD4-206ENST00000481353 MT1MQ8N339 61 aa2.5□□□□□ -2.01
PDCD4-206ENST00000481353 KMT2DO14686 5537 aa2.35□□□□□ -2.03
PDCD4-206ENST00000481353 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.03
PDCD4-206ENST00000481353 USH2AO75445 5202 aa2.33□□□□□ -2.04
PDCD4-206ENST00000481353 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
PDCD4-206ENST00000481353 PRM1P04553 51 aa2.28□□□□□ -2.04
PDCD4-206ENST00000481353 SPRR2FQ96RM1 72 aa2.27□□□□□ -2.05
PDCD4-206ENST00000481353 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
PDCD4-206ENST00000481353 SPRR2AP35326 72 aa2.16□□□□□ -2.06
PDCD4-206ENST00000481353 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
PDCD4-206ENST00000481353 FCGBPQ9Y6R7 5405 aaPredicted RBP2.12□□□□□ -2.07
PDCD4-206ENST00000481353 SPRR2EP22531 72 aa2.07□□□□□ -2.08
PDCD4-206ENST00000481353 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
PDCD4-206ENST00000481353 FSIP2Q5CZC0 6907 aa2.06□□□□□ -2.08
PDCD4-206ENST00000481353 SPRR2BP35325 72 aa2.06□□□□□ -2.08
PDCD4-206ENST00000481353 MUC12Q9UKN1 5478 aa2.02□□□□□ -2.09
PDCD4-206ENST00000481353 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
PDCD4-206ENST00000481353 SPRR2DP22532 72 aa1.94□□□□□ -2.1
PDCD4-206ENST00000481353 DSTQ03001 7570 aaKnown RBP1.87□□□□□ -2.11
PDCD4-206ENST00000481353 MACF1Q9UPN3 7388 aaKnown RBP1.86□□□□□ -2.11
PDCD4-206ENST00000481353 SYNE2Q8WXH0 6885 aaKnown RBP1.82□□□□□ -2.12
PDCD4-206ENST00000481353 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
PDCD4-206ENST00000481353 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
PDCD4-206ENST00000481353 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
PDCD4-206ENST00000481353 NEBP20929 6669 aa1.67□□□□□ -2.14
PDCD4-206ENST00000481353 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
PDCD4-206ENST00000481353 MT4P47944 62 aa1.61□□□□□ -2.15
PDCD4-206ENST00000481353 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
PDCD4-206ENST00000481353 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
PDCD4-206ENST00000481353 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
PDCD4-206ENST00000481353 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
PDCD4-206ENST00000481353 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
PDCD4-206ENST00000481353 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
PDCD4-206ENST00000481353 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
PDCD4-206ENST00000481353 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 85.9 ms