RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 USH2AO75445 5202 aa1.64□□□□□ -2.15
UPF3A-207ENST00000481131 CSAG1Q6PB30 78 aa1.63□□□□□ -2.15
UPF3A-207ENST00000481131 CYSTM1Q9H1C7 97 aa1.63□□□□□ -2.15
UPF3A-207ENST00000481131 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
UPF3A-207ENST00000481131 C20orf197Q8N268 126 aa1.62□□□□□ -2.15
UPF3A-207ENST00000481131 SMIM20Q8N5G0 67 aa1.62□□□□□ -2.15
UPF3A-207ENST00000481131 DMAC1Q96GE9 116 aa1.62□□□□□ -2.15
UPF3A-207ENST00000481131 SERP2Q8N6R1 65 aa1.61□□□□□ -2.15
UPF3A-207ENST00000481131 NDUFC1O43677 76 aa1.6□□□□□ -2.15
UPF3A-207ENST00000481131 MT1BP07438 61 aa1.58□□□□□ -2.16
UPF3A-207ENST00000481131 COX7CP15954 63 aa1.58□□□□□ -2.16
UPF3A-207ENST00000481131 LINC01554Q52M75 96 aa1.58□□□□□ -2.16
UPF3A-207ENST00000481131 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
UPF3A-207ENST00000481131 H0YAA0 97 aa1.57□□□□□ -2.16
UPF3A-207ENST00000481131 ACYP2P14621 99 aa1.57□□□□□ -2.16
UPF3A-207ENST00000481131 SPRR2GQ9BYE4 73 aa1.57□□□□□ -2.16
UPF3A-207ENST00000481131 KMT2DO14686 5537 aa1.57□□□□□ -2.16
UPF3A-207ENST00000481131 CCDC179H3BU77 68 aa1.56□□□□□ -2.16
UPF3A-207ENST00000481131 H7BZZ5 65 aa1.56□□□□□ -2.16
UPF3A-207ENST00000481131 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
UPF3A-207ENST00000481131 KRTAP19-6Q3LI70 58 aa1.56□□□□□ -2.16
UPF3A-207ENST00000481131 CHKB-CPT1BH3BT56 60 aa1.55□□□□□ -2.16
UPF3A-207ENST00000481131 Q5VV11 94 aa1.55□□□□□ -2.16
UPF3A-207ENST00000481131 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
UPF3A-207ENST00000481131 M0QZ58 72 aa1.53□□□□□ -2.16
UPF3A-207ENST00000481131 CRIPTQ9P021 101 aa1.53□□□□□ -2.16
UPF3A-207ENST00000481131 SPTSSBQ8NFR3 76 aa1.52□□□□□ -2.17
UPF3A-207ENST00000481131 A6NN06 94 aa1.51□□□□□ -2.17
UPF3A-207ENST00000481131 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
UPF3A-207ENST00000481131 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
UPF3A-207ENST00000481131 MT1XP80297 61 aa1.49□□□□□ -2.17
UPF3A-207ENST00000481131 ATP5EP56381 51 aaPredicted RBP1.47□□□□□ -2.17
UPF3A-207ENST00000481131 SPATA8Q6RVD6 105 aa1.47□□□□□ -2.17
UPF3A-207ENST00000481131 PLAC4Q8WY50 150 aa1.47□□□□□ -2.17
UPF3A-207ENST00000481131 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.18
UPF3A-207ENST00000481131 A0A0D9SG42 100 aa1.46□□□□□ -2.18
UPF3A-207ENST00000481131 SERP1Q9Y6X1 66 aa1.45□□□□□ -2.18
UPF3A-207ENST00000481131 A0A1B0GU69 56 aa1.44□□□□□ -2.18
UPF3A-207ENST00000481131 LINC01558Q9Y6Z2 57 aa1.42□□□□□ -2.18
UPF3A-207ENST00000481131 PRR15LQ9BU68 103 aa1.41□□□□□ -2.18
UPF3A-207ENST00000481131 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
UPF3A-207ENST00000481131 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
UPF3A-207ENST00000481131 KRTAP2-3P0C7H8 128 aa1.38□□□□□ -2.19
UPF3A-207ENST00000481131 KRTAP2-4Q9BYR9 128 aa1.38□□□□□ -2.19
UPF3A-207ENST00000481131 UQCR11O14957 56 aa1.36□□□□□ -2.19
UPF3A-207ENST00000481131 SPRR2EP22531 72 aa1.36□□□□□ -2.19
UPF3A-207ENST00000481131 SPRR2BP35325 72 aa1.36□□□□□ -2.19
UPF3A-207ENST00000481131 SPRR2AP35326 72 aa1.36□□□□□ -2.19
UPF3A-207ENST00000481131 RPS28P62857 69 aaKnown RBP1.36□□□□□ -2.19
UPF3A-207ENST00000481131 C10orf95Q9H7T3 257 aa1.36□□□□□ -2.19
UPF3A-207ENST00000481131 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
UPF3A-207ENST00000481131 MIR22HGQ0VDD5 57 aa1.35□□□□□ -2.19
UPF3A-207ENST00000481131 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
UPF3A-207ENST00000481131 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
UPF3A-207ENST00000481131 KRTAP19-7Q3SYF9 63 aa1.33□□□□□ -2.2
UPF3A-207ENST00000481131 ROMO1P60602 79 aa1.32□□□□□ -2.2
UPF3A-207ENST00000481131 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
UPF3A-207ENST00000481131 CDC42SE1Q9NRR8 79 aa1.32□□□□□ -2.2
UPF3A-207ENST00000481131 INE1O15225 51 aa1.31□□□□□ -2.2
UPF3A-207ENST00000481131 MT1EP04732 61 aa1.31□□□□□ -2.2
UPF3A-207ENST00000481131 SPRR2DP22532 72 aa1.31□□□□□ -2.2
UPF3A-207ENST00000481131 TNP1P09430 55 aa1.3□□□□□ -2.2
UPF3A-207ENST00000481131 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
UPF3A-207ENST00000481131 KRTAP19-3Q7Z4W3 81 aa1.27□□□□□ -2.21
UPF3A-207ENST00000481131 MT1LQ93083 61 aa1.27□□□□□ -2.21
UPF3A-207ENST00000481131 MT1MQ8N339 61 aa1.25□□□□□ -2.21
UPF3A-207ENST00000481131 MT1GP13640 62 aa1.23□□□□□ -2.21
UPF3A-207ENST00000481131 BRK1Q8WUW1 75 aa1.21□□□□□ -2.22
UPF3A-207ENST00000481131 MT4P47944 62 aa1.15□□□□□ -2.23
UPF3A-207ENST00000481131 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
UPF3A-207ENST00000481131 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
UPF3A-207ENST00000481131 MT1AP04731 61 aa1.07□□□□□ -2.24
UPF3A-207ENST00000481131 SYNE1Q8NF91 8797 aaKnown RBP1.05□□□□□ -2.24
UPF3A-207ENST00000481131 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
UPF3A-207ENST00000481131 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
UPF3A-207ENST00000481131 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
UPF3A-207ENST00000481131 PRM1P04553 51 aa0.66□□□□□ -2.3
UPF3A-207ENST00000481131 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 108.2 ms