RNA–Protein interactions for RNA: ENST00000480994.5

NECAB3-208, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 732 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-208	ENST00000480994		V9GYY9	64 aa		5.89	□□□□□ -1.47
NECAB3-208	ENST00000480994		Q1T7F1	81 aa		5.85	□□□□□ -1.47
NECAB3-208	ENST00000480994	KRTAP12-3	P60328	96 aa		5.84	□□□□□ -1.47
NECAB3-208	ENST00000480994	KRTAP4-9	Q9BYQ8	210 aa		5.83	□□□□□ -1.48
NECAB3-208	ENST00000480994	KRTAP25-1	Q3LHN0	102 aa		5.82	□□□□□ -1.48
NECAB3-208	ENST00000480994	LCE4A	Q5TA78	99 aa		5.81	□□□□□ -1.48
NECAB3-208	ENST00000480994		K7ERS5	55 aa		5.79	□□□□□ -1.48
NECAB3-208	ENST00000480994	KRTAP4-3	Q9BYR4	195 aa		5.79	□□□□□ -1.48
NECAB3-208	ENST00000480994	PSPHP1	O15172	72 aa		5.78	□□□□□ -1.48
NECAB3-208	ENST00000480994	LCE1D	Q5T752	114 aa		5.76	□□□□□ -1.49
NECAB3-208	ENST00000480994	GPR98	Q8WXG9	6306 aa		5.76	□□□□□ -1.49
NECAB3-208	ENST00000480994	KRTAP5-4	Q6L8H1	288 aa		5.74	□□□□□ -1.49
NECAB3-208	ENST00000480994	HMCN1	Q96RW7	5635 aa		5.71	□□□□□ -1.5
NECAB3-208	ENST00000480994	KRTAP4-7	Q9BYR0	210 aa		5.67	□□□□□ -1.5
NECAB3-208	ENST00000480994	KRTAP23-1	A1A580	65 aa		5.66	□□□□□ -1.5
NECAB3-208	ENST00000480994	MT4	P47944	62 aa		5.66	□□□□□ -1.5
NECAB3-208	ENST00000480994	KRTAP19-4	Q3LI73	84 aa		5.62	□□□□□ -1.51
NECAB3-208	ENST00000480994		A6NED7	52 aa		5.61	□□□□□ -1.51
NECAB3-208	ENST00000480994	RPS28	P62857	69 aa	Known RBP	5.56	□□□□□ -1.52
NECAB3-208	ENST00000480994	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.55	□□□□□ -1.52
NECAB3-208	ENST00000480994	KRTAP4-6	Q9BYQ5	205 aa		5.53	□□□□□ -1.52
NECAB3-208	ENST00000480994	CDC42SE1	Q9NRR8	79 aa		5.5	□□□□□ -1.53
NECAB3-208	ENST00000480994	AHNAK2	Q8IVF2	5795 aa		5.49	□□□□□ -1.53
NECAB3-208	ENST00000480994	PCP4	P48539	62 aa		5.48	□□□□□ -1.53
NECAB3-208	ENST00000480994	KRTAP15-1	Q3LI76	137 aa		5.48	□□□□□ -1.53
NECAB3-208	ENST00000480994	ROMO1	P60602	79 aa		5.42	□□□□□ -1.54
NECAB3-208	ENST00000480994	SPRR5	A0A1B0GTR4	108 aa		5.39	□□□□□ -1.55
NECAB3-208	ENST00000480994	LCE3C	Q5T5A8	94 aa		5.39	□□□□□ -1.55
NECAB3-208	ENST00000480994	LOC100996750	A0A140TA64	210 aa		5.38	□□□□□ -1.55
NECAB3-208	ENST00000480994	KRTAP20-2	Q3LI61	65 aa		5.37	□□□□□ -1.55
NECAB3-208	ENST00000480994	KRTAP5-10	Q6L8G5	202 aa		5.36	□□□□□ -1.55
NECAB3-208	ENST00000480994	KRTAP12-4	P60329	112 aa		5.33	□□□□□ -1.56
NECAB3-208	ENST00000480994	SYNE1	Q8NF91	8797 aa	Known RBP	5.27	□□□□□ -1.57
NECAB3-208	ENST00000480994	KRTAP5-3	Q6L8H2	238 aa		5.24	□□□□□ -1.57
NECAB3-208	ENST00000480994	KRTAP5-7	Q6L8G8	165 aa		5.16	□□□□□ -1.58
NECAB3-208	ENST00000480994	MT1A	P04731	61 aa		5.15	□□□□□ -1.59
NECAB3-208	ENST00000480994	KRTAP9-6	A8MVA2	160 aa		5.09	□□□□□ -1.59
NECAB3-208	ENST00000480994	KRTAP6-1	Q3LI64	71 aa		5.08	□□□□□ -1.6
NECAB3-208	ENST00000480994	KRTAP5-2	Q701N4	177 aa		5.05	□□□□□ -1.6
NECAB3-208	ENST00000480994	KRTAP9-4	Q9BYQ2	154 aa		4.95	□□□□□ -1.62
NECAB3-208	ENST00000480994	KRTAP4-11	Q9BYQ6	195 aa		4.88	□□□□□ -1.63
NECAB3-208	ENST00000480994	KRTAP6-2	Q3LI66	62 aa		4.84	□□□□□ -1.63
NECAB3-208	ENST00000480994	BRK1	Q8WUW1	75 aa		4.82	□□□□□ -1.64
NECAB3-208	ENST00000480994	KRTAP5-8	O75690	187 aa		4.74	□□□□□ -1.65
NECAB3-208	ENST00000480994	MT3	P25713	68 aa		4.69	□□□□□ -1.66
NECAB3-208	ENST00000480994	OBSCN	Q5VST9	7968 aa		4.6	□□□□□ -1.67
NECAB3-208	ENST00000480994	PMAIP1	Q13794	54 aa		4.52	□□□□□ -1.69
NECAB3-208	ENST00000480994	KRTAP5-1	Q6L8H4	278 aa		4.49	□□□□□ -1.69
NECAB3-208	ENST00000480994	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.48	□□□□□ -1.69
NECAB3-208	ENST00000480994	MUC5AC	P98088	5654 aa		4.47	□□□□□ -1.69
NECAB3-208	ENST00000480994	KRTAP9-9	Q9BYP9	154 aa		4.45	□□□□□ -1.7
NECAB3-208	ENST00000480994	AHNAK	Q09666	5890 aa	Known RBP	4.44	□□□□□ -1.7
NECAB3-208	ENST00000480994	PRO0628	Q9UI54	55 aa		4.37	□□□□□ -1.71
NECAB3-208	ENST00000480994	LCE1E	Q5T753	118 aa		4.34	□□□□□ -1.71
NECAB3-208	ENST00000480994	PRAC1	Q96KF2	57 aa		4.34	□□□□□ -1.71
NECAB3-208	ENST00000480994	KTN1-AS1	Q86SY8	53 aa		4.1	□□□□□ -1.75
NECAB3-208	ENST00000480994	KRTAP4-2	Q9BYR5	136 aa		4.07	□□□□□ -1.76
NECAB3-208	ENST00000480994	LCE1C	Q5T751	118 aa		4.02	□□□□□ -1.77
NECAB3-208	ENST00000480994	LCE1B	Q5T7P3	118 aa		4.02	□□□□□ -1.77
NECAB3-208	ENST00000480994	LCE3D	Q9BYE3	92 aa		3.89	□□□□□ -1.79
NECAB3-208	ENST00000480994	SVIP	Q8NHG7	77 aa		3.84	□□□□□ -1.79
NECAB3-208	ENST00000480994	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.71	□□□□□ -1.82
NECAB3-208	ENST00000480994	LUZP6	Q538Z0	58 aa		3.69	□□□□□ -1.82
NECAB3-208	ENST00000480994	LCE3E	Q5T5B0	92 aa		3.66	□□□□□ -1.82
NECAB3-208	ENST00000480994	KRTAP5-11	Q6L8G4	156 aa		3.66	□□□□□ -1.82
NECAB3-208	ENST00000480994	KRTAP4-12	Q9BQ66	201 aa		3.58	□□□□□ -1.84
NECAB3-208	ENST00000480994	LCE1F	Q5T754	118 aa		3.55	□□□□□ -1.84
NECAB3-208	ENST00000480994	KRTAP21-2	Q3LI59	83 aa		3.38	□□□□□ -1.87
NECAB3-208	ENST00000480994	PHGR1	C9JFL3	82 aa		3.14	□□□□□ -1.91
NECAB3-208	ENST00000480994	NDUFAF8	A1L188	74 aa		3.05	□□□□□ -1.92
NECAB3-208	ENST00000480994	KRTAP4-4	Q9BYR3	166 aa		3	□□□□□ -1.93
NECAB3-208	ENST00000480994	MUC19	Q7Z5P9	8384 aa		2.86	□□□□□ -1.95
NECAB3-208	ENST00000480994	PRM1	P04553	51 aa		2.75	□□□□□ -1.97
NECAB3-208	ENST00000480994		A0A0A0MQY5	61 aa		2.66	□□□□□ -1.98
NECAB3-208	ENST00000480994	INE1	O15225	51 aa		2.61	□□□□□ -1.99
NECAB3-208	ENST00000480994	KRTAP21-1	Q3LI58	79 aa		2.36	□□□□□ -2.03
NECAB3-208	ENST00000480994	MUC16	Q8WXI7	14507 aa		2.02	□□□□□ -2.09
NECAB3-208	ENST00000480994		H3BS24	57 aa		1.91	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 121.1 ms