RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
CTSA-206ENST00000480961 LCE5AQ5TCM9 118 aa7.36□□□□□ -1.23
CTSA-206ENST00000480961 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
CTSA-206ENST00000480961 LCE3BQ5TA77 95 aa7.3□□□□□ -1.24
CTSA-206ENST00000480961 MT1LQ93083 61 aa7.27□□□□□ -1.25
CTSA-206ENST00000480961 KRTAP2-2Q9BYT5 123 aa7.27□□□□□ -1.25
CTSA-206ENST00000480961 KRTAP2-1Q9BYU5 128 aa7.27□□□□□ -1.25
CTSA-206ENST00000480961 MT1GP13640 62 aa7.24□□□□□ -1.25
CTSA-206ENST00000480961 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
CTSA-206ENST00000480961 DSTQ03001 7570 aaKnown RBP7.21□□□□□ -1.25
CTSA-206ENST00000480961 ROMO1P60602 79 aa7.19□□□□□ -1.26
CTSA-206ENST00000480961 MT1MQ8N339 61 aa7.16□□□□□ -1.26
CTSA-206ENST00000480961 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
CTSA-206ENST00000480961 KRTAP23-1A1A580 65 aa7.06□□□□□ -1.28
CTSA-206ENST00000480961 KRTAP4-3Q9BYR4 195 aa7.06□□□□□ -1.28
CTSA-206ENST00000480961 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
CTSA-206ENST00000480961 A0A0A0MQY5 61 aa6.96□□□□□ -1.3
CTSA-206ENST00000480961 BRK1Q8WUW1 75 aa6.96□□□□□ -1.3
CTSA-206ENST00000480961 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
CTSA-206ENST00000480961 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
CTSA-206ENST00000480961 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
CTSA-206ENST00000480961 KRTAP4-9Q9BYQ8 210 aa6.77□□□□□ -1.33
CTSA-206ENST00000480961 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
CTSA-206ENST00000480961 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
CTSA-206ENST00000480961 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
CTSA-206ENST00000480961 HMCN1Q96RW7 5635 aa6.62□□□□□ -1.35
CTSA-206ENST00000480961 MT4P47944 62 aa6.61□□□□□ -1.35
CTSA-206ENST00000480961 LCE1DQ5T752 114 aa6.6□□□□□ -1.35
CTSA-206ENST00000480961 KRTAP5-4Q6L8H1 288 aa6.58□□□□□ -1.36
CTSA-206ENST00000480961 PMAIP1Q13794 54 aa6.54□□□□□ -1.36
CTSA-206ENST00000480961 KRTAP5-5Q701N2 237 aaPredicted RBP6.51□□□□□ -1.37
CTSA-206ENST00000480961 GPR98Q8WXG9 6306 aa6.45□□□□□ -1.38
CTSA-206ENST00000480961 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
CTSA-206ENST00000480961 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
CTSA-206ENST00000480961 PRAC1Q96KF2 57 aa6.3□□□□□ -1.4
CTSA-206ENST00000480961 PRO0628Q9UI54 55 aa6.3□□□□□ -1.4
CTSA-206ENST00000480961 AHNAK2Q8IVF2 5795 aa6.29□□□□□ -1.4
CTSA-206ENST00000480961 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
CTSA-206ENST00000480961 KRTAP20-2Q3LI61 65 aa6.22□□□□□ -1.41
CTSA-206ENST00000480961 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
CTSA-206ENST00000480961 MT1AP04731 61 aa6.17□□□□□ -1.42
CTSA-206ENST00000480961 KRTAP6-1Q3LI64 71 aa6.16□□□□□ -1.42
CTSA-206ENST00000480961 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
CTSA-206ENST00000480961 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
CTSA-206ENST00000480961 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
CTSA-206ENST00000480961 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
CTSA-206ENST00000480961 KRTAP5-10Q6L8G5 202 aa5.93□□□□□ -1.46
CTSA-206ENST00000480961 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
CTSA-206ENST00000480961 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
CTSA-206ENST00000480961 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
CTSA-206ENST00000480961 MT3P25713 68 aa5.63□□□□□ -1.51
CTSA-206ENST00000480961 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
CTSA-206ENST00000480961 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
CTSA-206ENST00000480961 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
CTSA-206ENST00000480961 KRTAP5-8O75690 187 aa5.4□□□□□ -1.54
CTSA-206ENST00000480961 KRTAP4-2Q9BYR5 136 aa5.29□□□□□ -1.56
CTSA-206ENST00000480961 MUC5ACP98088 5654 aa5.24□□□□□ -1.57
CTSA-206ENST00000480961 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
CTSA-206ENST00000480961 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
CTSA-206ENST00000480961 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.59
CTSA-206ENST00000480961 MUC5BQ9HC84 5762 aaPredicted RBP5.12□□□□□ -1.59
CTSA-206ENST00000480961 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
CTSA-206ENST00000480961 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
CTSA-206ENST00000480961 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.63
CTSA-206ENST00000480961 LCE1BQ5T7P3 118 aa4.83□□□□□ -1.64
CTSA-206ENST00000480961 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
CTSA-206ENST00000480961 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.67
CTSA-206ENST00000480961 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
CTSA-206ENST00000480961 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
CTSA-206ENST00000480961 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
CTSA-206ENST00000480961 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
CTSA-206ENST00000480961 PRM1P04553 51 aa3.72□□□□□ -1.81
CTSA-206ENST00000480961 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
CTSA-206ENST00000480961 INE1O15225 51 aa3.7□□□□□ -1.82
CTSA-206ENST00000480961 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
CTSA-206ENST00000480961 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
CTSA-206ENST00000480961 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
CTSA-206ENST00000480961 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms